RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 KATNAL2Q8IYT4 538 aa17.21■□□□□ 0.35
RER1-208ENST00000493207 PGBD3Q8N328 593 aa17.21■□□□□ 0.35
RER1-208ENST00000493207 PQLC3Q8N755 202 aa17.21■□□□□ 0.35
RER1-208ENST00000493207 FRS2Q8WU20 508 aa17.21■□□□□ 0.35
RER1-208ENST00000493207 TPSD1Q9BZJ3 242 aa17.21■□□□□ 0.35
RER1-208ENST00000493207 SLC6A17Q9H1V8 727 aa17.21■□□□□ 0.35
RER1-208ENST00000493207 PRSS16Q9NQE7 514 aa17.21■□□□□ 0.35
RER1-208ENST00000493207 RAPGEFL1Q9UHV5 662 aa17.21■□□□□ 0.35
RER1-208ENST00000493207 AMFRQ9UKV5 643 aa17.21■□□□□ 0.35
RER1-208ENST00000493207 PACSIN2Q9UNF0 486 aaPredicted RBP17.21■□□□□ 0.35
RER1-208ENST00000493207 ZNF487B1APH4 448 aa17.2■□□□□ 0.34
RER1-208ENST00000493207 ZBTB24O43167 697 aaPredicted RBP17.2■□□□□ 0.34
RER1-208ENST00000493207 SMAD6O43541 496 aaKnown RBP17.2■□□□□ 0.34
RER1-208ENST00000493207 SIN3BO75182 1162 aa17.2■□□□□ 0.34
RER1-208ENST00000493207 CD160O95971 181 aa17.2■□□□□ 0.34
RER1-208ENST00000493207 NDUFV2P19404 249 aa17.2■□□□□ 0.34
RER1-208ENST00000493207 CTNNA2P26232 953 aa17.2■□□□□ 0.34
RER1-208ENST00000493207 HOXA6P31267 233 aa17.2■□□□□ 0.34
RER1-208ENST00000493207 COPAP53621 1224 aa17.2■□□□□ 0.34
RER1-208ENST00000493207 PTPN5P54829 565 aa17.2■□□□□ 0.34
RER1-208ENST00000493207 C9orf64Q5T6V5 341 aa17.2■□□□□ 0.34
RER1-208ENST00000493207 MFSD7Q6UXD7 560 aa17.2■□□□□ 0.34
RER1-208ENST00000493207 ARHGAP36Q6ZRI8 547 aa17.2■□□□□ 0.34
RER1-208ENST00000493207 Q6ZVU0 165 aa17.2■□□□□ 0.34
RER1-208ENST00000493207 RASSF3Q86WH2 238 aa17.2■□□□□ 0.34
RER1-208ENST00000493207 VSIG1Q86XK7 387 aa17.2■□□□□ 0.34
RER1-208ENST00000493207 PTPRN2Q92932 1015 aa17.2■□□□□ 0.34
RER1-208ENST00000493207 RNF157Q96PX1 679 aa17.2■□□□□ 0.34
RER1-208ENST00000493207 MAK16Q9BXY0 300 aaKnown RBP17.2■□□□□ 0.34
RER1-208ENST00000493207 FAM126AQ9BYI3 521 aaPredicted RBP17.2■□□□□ 0.34
RER1-208ENST00000493207 ZSCAN32Q9NX65 697 aa17.2■□□□□ 0.34
RER1-208ENST00000493207 EBF1Q9UH73 591 aa17.2■□□□□ 0.34
RER1-208ENST00000493207 PCDHA3Q9Y5H8 950 aa17.2■□□□□ 0.34
RER1-208ENST00000493207 SHROOM3Q8TF72 1996 aa17.2■□□□□ 0.34
RER1-208ENST00000493207 TARSL2A2RTX5 802 aaKnown RBP17.19■□□□□ 0.34
RER1-208ENST00000493207 CCDC66A2RUB6 948 aa17.19■□□□□ 0.34
RER1-208ENST00000493207 J3KR12 359 aa17.19■□□□□ 0.34
RER1-208ENST00000493207 AXIN1O15169 862 aa17.19■□□□□ 0.34
RER1-208ENST00000493207 MFSD11O43934 449 aa17.19■□□□□ 0.34
RER1-208ENST00000493207 BNIP3LO60238 219 aa17.19■□□□□ 0.34
RER1-208ENST00000493207 ZRANB2O95218 330 aaKnown RBP eCLIP17.19■□□□□ 0.344e-8■■□□□ 11.8
RER1-208ENST00000493207 CDKN2BP42772 138 aa17.19■□□□□ 0.34
RER1-208ENST00000493207 CLCN6P51797 869 aa17.19■□□□□ 0.34
RER1-208ENST00000493207 GEMIN4P57678 1058 aaKnown RBP17.19■□□□□ 0.34
RER1-208ENST00000493207 SLC20A2Q08357 652 aa17.19■□□□□ 0.34
RER1-208ENST00000493207 PAFAH1B3Q15102 231 aaKnown RBP17.19■□□□□ 0.34
RER1-208ENST00000493207 C22orf39Q6P5X5 142 aa17.19■□□□□ 0.34
RER1-208ENST00000493207 SPOCD1Q6ZMY3 1216 aa17.19■□□□□ 0.34
RER1-208ENST00000493207 WDR5BQ86VZ2 330 aa17.19■□□□□ 0.34
RER1-208ENST00000493207 LONP2Q86WA8 852 aa17.19■□□□□ 0.34
RER1-208ENST00000493207 CACUL1Q86Y37 369 aa17.19■□□□□ 0.34
RER1-208ENST00000493207 RFX6Q8HWS3 928 aa17.19■□□□□ 0.34
RER1-208ENST00000493207 CCDC50Q8IVM0 306 aa17.19■□□□□ 0.34
RER1-208ENST00000493207 RCOR2Q8IZ40 523 aa17.19■□□□□ 0.34
RER1-208ENST00000493207 OR2T3Q8NH03 318 aa17.19■□□□□ 0.34
RER1-208ENST00000493207 EXD1Q8NHP7 514 aa17.19■□□□□ 0.34
RER1-208ENST00000493207 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.19■□□□□ 0.34
RER1-208ENST00000493207 NELL1Q92832 810 aa17.19■□□□□ 0.34
RER1-208ENST00000493207 MRGPRX1Q96LB2 322 aa17.19■□□□□ 0.34
RER1-208ENST00000493207 MKRN2Q9H000 416 aaKnown RBP17.19■□□□□ 0.34
RER1-208ENST00000493207 TNKS2Q9H2K2 1166 aa17.19■□□□□ 0.34
RER1-208ENST00000493207 FCF1Q9Y324 198 aaKnown RBP17.19■□□□□ 0.34
RER1-208ENST00000493207 FANCMQ8IYD8 2048 aa17.18■□□□□ 0.34
RER1-208ENST00000493207 CXorf51AA0A1B0GTR3 108 aa17.18■□□□□ 0.34
RER1-208ENST00000493207 ZSCAN5CA6NGD5 496 aaPredicted RBP17.18■□□□□ 0.34
RER1-208ENST00000493207 PRAMEF11O60813 436 aa17.18■□□□□ 0.34
RER1-208ENST00000493207 RWDD2BP57060 319 aa17.18■□□□□ 0.34
RER1-208ENST00000493207 LLGL1Q15334 1064 aa17.18■□□□□ 0.34
RER1-208ENST00000493207 KAZNQ674X7 775 aa17.18■□□□□ 0.34
RER1-208ENST00000493207 KIAA1324Q6UXG2 1013 aaKnown RBP17.18■□□□□ 0.34
RER1-208ENST00000493207 TMPRSS6Q8IU80 811 aa17.18■□□□□ 0.34
RER1-208ENST00000493207 STK40Q8N2I9 435 aa17.18■□□□□ 0.34
RER1-208ENST00000493207 ATPAF2Q8N5M1 289 aa17.18■□□□□ 0.34
RER1-208ENST00000493207 ATOH1Q92858 354 aaPredicted RBP17.18■□□□□ 0.34
RER1-208ENST00000493207 RBM41Q96IZ5 413 aaKnown RBP17.18■□□□□ 0.34
RER1-208ENST00000493207 ALS2CR12Q96Q35 445 aa17.18■□□□□ 0.34
RER1-208ENST00000493207 PRDM16Q9HAZ2 1276 aa17.18■□□□□ 0.34
RER1-208ENST00000493207 SP110Q9HB58 689 aa17.18■□□□□ 0.34
RER1-208ENST00000493207 PDFQ9HBH1 243 aa17.18■□□□□ 0.34
RER1-208ENST00000493207 UBA2Q9UBT2 640 aaPredicted RBP17.18■□□□□ 0.34
RER1-208ENST00000493207 CCDC163A0A0D9SF12 145 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 APOL1O14791 398 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 ZNF821O75541 412 aaPredicted RBP17.17■□□□□ 0.34
RER1-208ENST00000493207 TMCC1O94876 653 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 MAP3K6O95382 1288 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 KRT10P13645 584 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 PEX5P50542 639 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 DNA2P51530 1060 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 DYNLT1P63172 113 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 GBE1Q04446 702 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 TAZQ16635 292 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 TFDP3Q5H9I0 405 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 SLC9A4Q6AI14 798 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 UBL4BQ8N7F7 174 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 PLD5Q8N7P1 536 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 ZBTB44Q8NCP5 570 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 ALG3Q92685 438 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 PRCCQ92733 491 aaPredicted RBP17.17■□□□□ 0.34
RER1-208ENST00000493207 SIPA1Q96FS4 1042 aa17.17■□□□□ 0.34
RER1-208ENST00000493207 CEP44Q9C0F1 390 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms