RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 CTSOP43234 321 aaPredicted RBP5.54□□□□□ -1.52
SEC13-219ENST00000492602 SGSHP51688 502 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 PGDP52209 483 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 TAS2R38P59533 333 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 CDK18Q07002 472 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 EIF2B5Q13144 721 aaKnown RBP5.54□□□□□ -1.52
SEC13-219ENST00000492602 ERV3-1Q14264 604 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 ARID5BQ14865 1188 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 TCEA2Q15560 299 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 ZNF174Q15697 407 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 ME3Q16798 604 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 SKOR2Q2VWA4 1001 aaPredicted RBP5.54□□□□□ -1.52
SEC13-219ENST00000492602 ZNF284Q2VY69 593 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 MAP9Q49MG5 647 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 CRTC2Q53ET0 693 aaPredicted RBP5.54□□□□□ -1.52
SEC13-219ENST00000492602 FAM46CQ5VWP2 391 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 RNF219Q5W0B1 726 aaPredicted RBP5.54□□□□□ -1.52
SEC13-219ENST00000492602 JMJD6Q6NYC1 403 aaPredicted RBP5.54□□□□□ -1.52
SEC13-219ENST00000492602 KYAT3Q6YP21 454 aaKnown RBP5.54□□□□□ -1.52
SEC13-219ENST00000492602 DYMQ7RTS9 669 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 GPRIN1Q7Z2K8 1008 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 ZNF438Q7Z4V0 828 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 HORMAD1Q86X24 394 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 BRSK2Q8IWQ3 736 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 FAM217AQ8IXS0 508 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 NRSN1Q8IZ57 195 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 MYCT1Q8N699 235 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 Q8NA96 180 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 FAM184AQ8NB25 1140 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 KDM1BQ8NB78 822 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 LRRN4CLQ8ND94 238 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 CCDC112Q8NEF3 446 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 OR6C4Q8NGE1 309 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 NOC3LQ8WTT2 800 aaKnown RBP5.54□□□□□ -1.52
SEC13-219ENST00000492602 SCG3Q8WXD2 468 aaKnown RBP5.54□□□□□ -1.52
SEC13-219ENST00000492602 NDRG1Q92597 394 aaKnown RBP5.54□□□□□ -1.52
SEC13-219ENST00000492602 KCNN1Q92952 543 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 ART4Q93070 314 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 SNRNP40Q96DI7 357 aaKnown RBP5.54□□□□□ -1.52
SEC13-219ENST00000492602 SAAL1Q96ER3 474 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 ANKRD36BP1Q96IX9 119 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 RPL10LQ96L21 214 aaKnown RBP5.54□□□□□ -1.52
SEC13-219ENST00000492602 RANBP9Q96S59 729 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 SMOQ99835 787 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 LRRC61Q9BV99 259 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 TRIM8Q9BZR9 551 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 CLPBQ9H078 707 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 IKZF4Q9H2S9 585 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 RDH14Q9HBH5 336 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 MRPL40Q9NQ50 206 aaKnown RBP5.54□□□□□ -1.52
SEC13-219ENST00000492602 GPR27Q9NS67 375 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 ASF1BQ9NVP2 202 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 RBAKQ9NYW8 714 aaPredicted RBP5.54□□□□□ -1.52
SEC13-219ENST00000492602 COPG2Q9UBF2 871 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 SARDHQ9UL12 918 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 ERVW-1Q9UQF0 538 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 POLHQ9Y253 713 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 HS3ST3A1Q9Y663 406 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 STYXL1Q9Y6J8 313 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 PKDREJQ9NTG1 2253 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 ARHGEF17Q96PE2 2063 aaPredicted RBP5.54□□□□□ -1.52
SEC13-219ENST00000492602 UNC13CQ8NB66 2214 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 PRRC2CQ9Y520 2896 aaKnown RBP5.53□□□□□ -1.52
SEC13-219ENST00000492602 A6NCN8 305 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 PP2D1A8MPX8 630 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 C1QTNF3-AMACRE9PGA6 284 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 INPP4BO15327 924 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 GRID2O43424 1007 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 PFKFB2O60825 505 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 TBL1XO60907 577 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 LRCH4O75427 683 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 PRPF6O94906 941 aaKnown RBP5.53□□□□□ -1.52
SEC13-219ENST00000492602 PCDH8O95206 1070 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 PAK4O96013 591 aaPredicted RBP5.53□□□□□ -1.52
SEC13-219ENST00000492602 CELA2BP08218 269 aaPredicted RBP5.53□□□□□ -1.52
SEC13-219ENST00000492602 SRPRAP08240 638 aaKnown RBP5.53□□□□□ -1.52
SEC13-219ENST00000492602 FURINP09958 794 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 VAV1P15498 845 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 SCP2P22307 547 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 RABIFP47224 123 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 PSEN1P49768 467 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 NEK4P51957 841 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 PMS2P54278 862 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 ZNF445P59923 1031 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 TNNC1P63316 161 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 LTBQ06643 244 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 ABHD18Q0P651 414 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 TPRG1LQ5T0D9 272 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 DCAF12Q5T6F0 453 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 FAXCQ5TGI0 409 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 KRT79Q5XKE5 535 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 SEL1L3Q68CR1 1132 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 NEK5Q6P3R8 708 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 SCD5Q86SK9 330 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 TMEM135Q86UB9 458 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 PIM3Q86V86 326 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 PRIMA1Q86XR5 153 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 MFN1Q8IWA4 741 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 PHACTR4Q8IZ21 702 aa5.53□□□□□ -1.52
SEC13-219ENST00000492602 ZNF295-AS1Q8N0V1 137 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms