RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 KIF5CO60282 957 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 MT-CO3P00414 261 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 SRPRAP08240 638 aaKnown RBP13.53□□□□□ -0.24
HDAC3-213ENST00000492506 EZRP15311 586 aaKnown RBP13.53□□□□□ -0.24
HDAC3-213ENST00000492506 C5AR1P21730 350 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 GTF2H1P32780 548 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 PSMD8P48556 350 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 METAP1P53582 386 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 FANCCQ00597 558 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 BST2Q10589 180 aaKnown RBP13.53□□□□□ -0.24
HDAC3-213ENST00000492506 KIF26BQ2KJY2 2108 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 PKDCCQ504Y2 493 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 AP1ARQ63HQ0 302 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 NUGGCQ68CJ6 796 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 NAPEPLDQ6IQ20 393 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 IQCHQ86VS3 1027 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 STK40Q8N2I9 435 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 SLC25A45Q8N413 288 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 HJURPQ8NCD3 748 aaPredicted RBP13.53□□□□□ -0.24
HDAC3-213ENST00000492506 ZNF248Q8NDW4 579 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 OR14C36Q8NHC7 312 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 UBA3Q8TBC4 463 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 LGMNQ99538 433 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 ACTR5Q9H9F9 607 aaPredicted RBP13.53□□□□□ -0.24
HDAC3-213ENST00000492506 CPNE5Q9HCH3 593 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 CNGB3Q9NQW8 809 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 RAB20Q9NX57 234 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 KIAA1468Q9P260 1216 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 TPX2Q9ULW0 747 aaKnown RBP13.53□□□□□ -0.24
HDAC3-213ENST00000492506 COL12A1Q99715 3063 aa13.53□□□□□ -0.24
HDAC3-213ENST00000492506 PTPN13Q12923 2485 aa13.52□□□□□ -0.24
HDAC3-213ENST00000492506 EDDM13A0A1B0GTR0 161 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 CTAGE15A4D2H0 777 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 GOLGA8KD6RF30 607 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 SDC3O75056 442 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 ADH1BP00325 375 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 CCDC175P0C221 793 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 CTAGE8P0CG41 777 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 KRT13P13646 458 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 SLC11A2P49281 568 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 E2F1Q01094 437 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 RHDQ02161 417 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 ZNF211Q13398 564 aaPredicted RBP13.52□□□□□ -0.25
HDAC3-213ENST00000492506 SLC45A4Q5BKX6 768 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 PITRM1Q5JRX3 1037 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 CDCP2Q5VXM1 449 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 KDM7AQ6ZMT4 941 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 CTAGE6Q86UF2 777 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 UNC45BQ8IWX7 931 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 CTAGE4Q8IX94 777 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 SIX6OS1Q8N1H7 587 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 FBXL13Q8NEE6 735 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 TTC9Q92623 222 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 EEF2KMTQ96G04 330 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 SGSM3Q96HU1 749 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 FCRL2Q96LA5 508 aaPredicted RBP13.52□□□□□ -0.25
HDAC3-213ENST00000492506 ZNF578Q96N58 590 aaPredicted RBP13.52□□□□□ -0.25
HDAC3-213ENST00000492506 HOMER3Q9NSC5 361 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 SPATS2LQ9NUQ6 558 aaKnown RBP13.52□□□□□ -0.25
HDAC3-213ENST00000492506 CYTH4Q9UIA0 394 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 SSUH2Q9Y2M2 353 aa13.52□□□□□ -0.25
HDAC3-213ENST00000492506 UBR5O95071 2799 aaPredicted RBP13.52□□□□□ -0.25
HDAC3-213ENST00000492506 TBC1D3DA0A087WVF3 549 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 TBC1D3IA0A087WXS9 549 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 TBC1D3EA0A087X179 549 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 TBC1D3KA0A087X1G2 549 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 TBC1D3FA6NER0 549 aaPredicted RBP13.51□□□□□ -0.25
HDAC3-213ENST00000492506 TBC1D3LB9A6J9 549 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 O00370 1275 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 DXOO77932 396 aaKnown RBP13.51□□□□□ -0.25
HDAC3-213ENST00000492506 FYNP06241 537 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 TBC1D3HP0C7X1 549 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 GIMD1P0DJR0 217 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 VAV1P15498 845 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 MZF1P28698 734 aaPredicted RBP13.51□□□□□ -0.25
HDAC3-213ENST00000492506 PSMC2P35998 433 aaKnown RBP13.51□□□□□ -0.25
HDAC3-213ENST00000492506 ME1P48163 572 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 RWDD2BP57060 319 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 TBX4P57082 545 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 PCBP4P57723 403 aaKnown RBP13.51□□□□□ -0.25
HDAC3-213ENST00000492506 TMPRSS3P57727 454 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 ECT2LQ008S8 904 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 ADCY2Q08462 1091 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 ZCWPW2Q504Y3 356 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 TAF1BQ53T94 588 aaPredicted RBP13.51□□□□□ -0.25
HDAC3-213ENST00000492506 SGO2Q562F6 1265 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 MS4A13Q5J8X5 152 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 TBC1D3GQ6DHY5 549 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 TBC1D3CQ6IPX1 549 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 TBC1D3Q8IZP1 549 aaPredicted RBP13.51□□□□□ -0.25
HDAC3-213ENST00000492506 APCDD1Q8J025 514 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 CFAP52Q8N1V2 620 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 CARNMT1Q8N4J0 409 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 UBR7Q8N806 425 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 SNRNP27Q8WVK2 155 aaKnown RBP13.51□□□□□ -0.25
HDAC3-213ENST00000492506 P3H4Q92791 437 aa13.51□□□□□ -0.25
HDAC3-213ENST00000492506 NAF1Q96HR8 494 aaKnown RBP13.51□□□□□ -0.25
HDAC3-213ENST00000492506 RPL10LQ96L21 214 aaKnown RBP13.51□□□□□ -0.25
HDAC3-213ENST00000492506 BAG1Q99933 345 aaPredicted RBP13.51□□□□□ -0.25
HDAC3-213ENST00000492506 PAIP2Q9BPZ3 127 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms