RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 SLC25A13Q9UJS0 675 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 PPM1HQ9ULR3 514 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 ZFR2Q9UPR6 939 aaKnown RBP9.13□□□□□ -0.95
HDAC3-211ENST00000491581 NEU3Q9UQ49 428 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 ITM2BQ9Y287 266 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 TBC1D30Q9Y2I9 924 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 RAXQ9Y2V3 346 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 FCF1Q9Y324 198 aaKnown RBP9.13□□□□□ -0.95
HDAC3-211ENST00000491581 CHD5Q8TDI0 1954 aa9.13□□□□□ -0.95
HDAC3-211ENST00000491581 COL27A1Q8IZC6 1860 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-211ENST00000491581 FREM2Q5SZK8 3169 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 ANKRD36A6QL64 1941 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 A0A1W2PQU0 124 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 FAM221BA6H8Z2 402 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 LRRC72A6NJI9 287 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 DRGXA6NNA5 263 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 KPNA3O00505 521 aaPredicted RBP9.12□□□□□ -0.95
HDAC3-211ENST00000491581 RAD51BO15315 384 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 FLRT2O43155 660 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 PLRG1O43660 514 aaKnown RBP9.12□□□□□ -0.95
HDAC3-211ENST00000491581 RNGTTO60942 597 aaKnown RBP9.12□□□□□ -0.95
HDAC3-211ENST00000491581 DKK1O94907 266 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 ADH1BP00325 375 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 ERCC5P28715 1186 aaPredicted RBP9.12□□□□□ -0.95
HDAC3-211ENST00000491581 GABRB2P47870 512 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 CCT8P50990 548 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 CDH4P55283 916 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 C21orf59P57076 290 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 JAM2P57087 298 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 NXPH1P58417 271 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 RACK1P63244 317 aaKnown RBP9.12□□□□□ -0.95
HDAC3-211ENST00000491581 CYP4F3Q08477 520 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 FGL2Q14314 439 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 ELAVL3Q14576 367 aaKnown RBP9.12□□□□□ -0.95
HDAC3-211ENST00000491581 TEAD4Q15561 434 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 COL28A1Q2UY09 1125 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 SLC25A52Q3SY17 297 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 CCDC14Q49A88 953 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 C5orf22Q49AR2 442 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 DPY19L3Q6ZPD9 716 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 KANSL1Q7Z3B3 1105 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 BNIPLQ7Z465 357 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 GLRX5Q86SX6 157 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 PROSER1Q86XN7 944 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 SAP25Q8TEE9 199 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 HNRNPLLQ8WVV9 542 aaKnown RBP9.12□□□□□ -0.95
HDAC3-211ENST00000491581 RXFP2Q8WXD0 754 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 OR8D1Q8WZ84 308 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 SPAG5Q96R06 1193 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 ELF4Q99607 663 aaPredicted RBP9.12□□□□□ -0.95
HDAC3-211ENST00000491581 TM6SF2Q9BZW4 377 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 PCED1AQ9H1Q7 454 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 SLC12A6Q9UHW9 1150 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 DNAI1Q9UI46 699 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 FZD4Q9ULV1 537 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 SIK3Q9Y2K2 1263 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 IGF2RP11717 2491 aa9.12□□□□□ -0.95
HDAC3-211ENST00000491581 DMXL2Q8TDJ6 3036 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 TRABD2BA6NFA1 517 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 TLR4O00206 839 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 TRIM38O00635 465 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 MCF2LO15068 1137 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 LATO43561 262 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 CLDN11O75508 207 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 LEFTY1O75610 366 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 ZMPSTE24O75844 475 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 ZNF883P0CG24 379 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 SLC2A3P11169 496 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 ATP1A3P13637 1013 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 EPHA8P29322 1005 aaPredicted RBP9.11□□□□□ -0.95
HDAC3-211ENST00000491581 OR1E1P30953 314 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 CHRNA3P32297 505 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 ABL2P42684 1182 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 DNA2P51530 1060 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 CCR5P51681 352 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 COPB1P53618 953 aaKnown RBP9.11□□□□□ -0.95
HDAC3-211ENST00000491581 OGDHQ02218 1023 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 SEMG2Q02383 582 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 CAMK2BQ13554 666 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 SYCP1Q15431 976 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 TCEA2Q15560 299 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 ATXN7L2Q5T6C5 722 aaPredicted RBP9.11□□□□□ -0.95
HDAC3-211ENST00000491581 C22orf39Q6P5X5 142 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 IL27RAQ6UWB1 636 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 TMPRSS7Q7RTY8 843 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 APTXQ7Z2E3 356 aaKnown RBP9.11□□□□□ -0.95
HDAC3-211ENST00000491581 FAM114A1Q8IWE2 563 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 SLC22A18ASQ8N1D0 253 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 SLC25A45Q8N413 288 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 KDM1BQ8NB78 822 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 OR13H1Q8NG92 308 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 FUBP1Q96AE4 644 aaKnown RBP9.11□□□□□ -0.95
HDAC3-211ENST00000491581 FAM131CQ96AQ9 280 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 CNDP2Q96KP4 475 aaKnown RBP9.11□□□□□ -0.95
HDAC3-211ENST00000491581 TRIM62Q9BVG3 475 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 STK33Q9BYT3 514 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 IRX2Q9BZI1 471 aaPredicted RBP9.11□□□□□ -0.95
HDAC3-211ENST00000491581 FBRSQ9HAH7 460 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 OSGEPQ9NPF4 335 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 GPATCH2LQ9NWQ4 482 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms