RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 RAD51Q06609 339 aa16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 SCYL2Q6P3W7 929 aa16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 SLFN11Q7Z7L1 901 aa16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 GLRX5Q86SX6 157 aa16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 IQCHQ86VS3 1027 aa16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 PHF13Q86YI8 300 aaPredicted RBP16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 DRC7Q8IY82 874 aa16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 PCDH20Q8N6Y1 951 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 C3orf20Q8ND61 904 aa16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 TBC1D31Q96DN5 1066 aa16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 ELF4Q99607 663 aaPredicted RBP16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 MAGEH1Q9H213 219 aa16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 RTN4Q9NQC3 1192 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 SERGEFQ9UGK8 458 aa16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 IL36AQ9UHA7 158 aa16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 FNDC3AQ9Y2H6 1198 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 MSRB2Q9Y3D2 182 aa16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 DMXL1Q9Y485 3027 aa16.94■□□□□ 0.3
PDLIM2-217ENST00000491330 GON4LQ3T8J9 2241 aa16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 CNOT1A5YKK6 2376 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 FAM170AA1A519 330 aa16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 ZSCAN5CA6NGD5 496 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 C2CD4BA6NLJ0 364 aa16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 SIGLEC16A6NMB1 481 aa16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 TNFSF14O43557 240 aa16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 PLRG1O43660 514 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 HYAL3O43820 417 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 FTH1P19P0C7X4 201 aa16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 CDK4P11802 303 aa16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 UNGP13051 313 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 TFE3P19532 575 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 CTSKP43235 329 aa16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 GSCP56915 257 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 NRG1Q02297 640 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 CCDC14Q49A88 953 aa16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 OTUD1Q5VV17 481 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 FBXL19Q6PCT2 694 aa16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 ZSCAN30Q86W11 494 aa16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 TRIM69Q86WT6 500 aa16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 RYBPQ8N488 228 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 MFSD2AQ8NA29 543 aa16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 FAM174AQ8TBP5 190 aa16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 FAM172AQ8WUF8 416 aa16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 SLC6A18Q96N87 628 aa16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 EPAS1Q99814 870 aa16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 CATSPERBQ9H7T0 1116 aa16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 IL21RQ9HBE5 538 aa16.93■□□□□ 0.3
PDLIM2-217ENST00000491330 CKAP5Q14008 2032 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 GOLGA6L19H0YKK7 550 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 TLR4O00206 839 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 SNAP91O60641 907 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 RAMP2O60895 175 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 RTN2O75298 545 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 PCDH8O95206 1070 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 SERPINC1P01008 464 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 PLEKP08567 350 aaPredicted RBP16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 VAV1P15498 845 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 CHRNB2P17787 502 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 RRM1P23921 792 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 AKT2P31751 481 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 SERPINH1P50454 418 aaKnown RBP16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 CNTN1Q12860 1018 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 IQCB1Q15051 598 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 C15orf59Q2T9L4 293 aaPredicted RBP16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 FIGNQ5HY92 759 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 ACAD10Q6JQN1 1059 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 C22orf39Q6P5X5 142 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 PHLDB2Q86SQ0 1253 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 GALNT15Q8N3T1 639 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 ADAMTS14Q8WXS8 1223 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 NTAN1Q96AB6 310 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 ARHGEF26Q96DR7 871 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 LRIG1Q96JA1 1093 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 VCPIP1Q96JH7 1222 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 FEM1CQ96JP0 617 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 CAMK1GQ96NX5 476 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 NCAPGQ9BPX3 1015 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 HEPHQ9BQS7 1158 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 PARVAQ9NVD7 372 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 FTSJ1Q9UET6 329 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 SNX10Q9Y5X0 201 aa16.92■□□□□ 0.3
PDLIM2-217ENST00000491330 A0A0D9SEW6 157 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 A0A1B0GTH6 734 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 A0A1B0GTQ1 180 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 SYCE3A1L190 88 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 H0Y8X5 98 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 NEMP1O14524 444 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 LATO43561 262 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 RNF8O76064 485 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 ATP1A3P13637 1013 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 MAT2AP31153 395 aaKnown RBP16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 RFC1P35251 1148 aaPredicted RBP16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 DRD3P35462 400 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 IRAK1P51617 712 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 NEK3P51956 506 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 ZNF143P52747 638 aaPredicted RBP16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 SNRPD1P62314 119 aaKnown RBP16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 POM121L1PQ3SYA9 428 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 CARD16Q5EG05 197 aa16.91■□□□□ 0.3
PDLIM2-217ENST00000491330 LINGO4Q6UY18 593 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms