RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 ARHGAP40Q5TG30 622 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 PXDC1Q5TGL8 231 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 GKAP1Q5VSY0 366 aaPredicted RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 PRAMEF17Q5VTA0 474 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 SFRP4Q6FHJ7 346 aaPredicted RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 C8orf74Q6P047 294 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 ALKBH5Q6P6C2 394 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 MOXD1Q6UVY6 613 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 CCDC121Q6ZUS5 278 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 H2AFVQ71UI9 128 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 ZNF551Q7Z340 670 aaPredicted RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 PIGWQ7Z7B1 504 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 GLCCI1Q86VQ1 547 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 NLRP14Q86W24 1093 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 PDSS2Q86YH6 399 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 SRRM1Q8IYB3 904 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 MPP5Q8N3R9 675 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 RASGEF1CQ8N431 466 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 SYT2Q8N9I0 419 aaPredicted RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 PNLDC1Q8NA58 520 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 USP38Q8NB14 1042 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 PRSS3P2Q8NHM4 247 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 TBCKQ8TEA7 893 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 HDAC7Q8WUI4 952 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 TMEM174Q8WUU8 243 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 TCP11Q8WWU5 503 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 DDX17Q92841 729 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 DNAJC19Q96DA6 116 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 CAPZA3Q96KX2 299 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 CNOT6LQ96LI5 555 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 CCDC17Q96LX7 622 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 CCDC114Q96M63 670 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 FAM20AQ96MK3 541 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 CCDC43Q96MW1 224 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 RUNDC3BQ96NL0 473 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 MOGAT1Q96PD6 335 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 ZIM3Q96PE6 472 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 RPS6KC1Q96S38 1066 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 PLIN2Q99541 437 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 TIMP4Q99727 224 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 MMTAG2Q9BU76 263 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 TUBB6Q9BUF5 446 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 KRTAP9-8Q9BYQ0 159 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 STK33Q9BYT3 514 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 FAM129AQ9BZQ8 928 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 RAB17Q9H0T7 212 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 STMN4Q9H169 189 aaPredicted RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 TAOK3Q9H2K8 898 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 TMEM60Q9H2L4 133 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 SH2D4AQ9H788 454 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 PSTPIP2Q9H939 334 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 VAT1LQ9HCJ6 419 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 BATF3Q9NR55 127 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 ZNF277Q9NRM2 450 aaPredicted RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 AASDHPPTQ9NRN7 309 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 BLOC1S4Q9NUP1 217 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 PNPOQ9NVS9 261 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 CTTNBP2NLQ9P2B4 639 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 DKK3Q9UBP4 350 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 SEC63Q9UGP8 760 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 TUBD1Q9UJT1 453 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 NFU1Q9UMS0 254 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 TRAF3IP3Q9Y228 551 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 STXBP5LQ9Y2K9 1186 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 UTP11Q9Y3A2 253 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 IPPQ9Y573 584 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 NFS1Q9Y697 457 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 CAPN7Q9Y6W3 813 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 ALS2Q96Q42 1657 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 ANKRD36CQ5JPF3 1778 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 FNDC1Q4ZHG4 1894 aaPredicted RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 ARHGEF17Q96PE2 2063 aaPredicted RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 TJP1Q07157 1748 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 LRP6O75581 1613 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 CYP2D7A0A087X1C5 515 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 LOC102724159A0A0B4J2E5 919 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 GOLGA6L10A0A0M3HER8 536 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 ANKRD62A6NC57 917 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 C5orf60A6NFR6 353 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 CFAP73A6NFT4 308 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 LRRC53A6NM62 1247 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 KCNU1A8MYU2 1149 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 E7EVH7 732 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 SNAP23O00161 211 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PSMD9O00233 223 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PMM2O15305 246 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 P4HA2O15460 535 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 TRAPPC3O43617 180 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 BUB1O43683 1085 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 MGRN1O60291 552 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 CEP104O60308 925 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PCDHGA12O60330 932 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 NMT2O60551 498 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 TLR5O60602 858 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 DNAJB5O75953 348 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 FLOT1O75955 427 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 HEXIM1O94992 359 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 NTSR2O95665 410 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 GGPS1O95749 300 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms