RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 ZCCHC8Q6NZY4 707 aaKnown RBP14□□□□□ -0.17
CTDSP1-210ENST00000491064 GUSBP11Q6P575 273 aa14□□□□□ -0.17
CTDSP1-210ENST00000491064 SH2D3CQ8N5H7 860 aa14□□□□□ -0.17
CTDSP1-210ENST00000491064 ATP6V0D2Q8N8Y2 350 aa14□□□□□ -0.17
CTDSP1-210ENST00000491064 EXD3Q8N9H8 876 aa14□□□□□ -0.17
CTDSP1-210ENST00000491064 ZNF548Q8NEK5 533 aaPredicted RBP14□□□□□ -0.17
CTDSP1-210ENST00000491064 OR52K2Q8NGK3 314 aa14□□□□□ -0.17
CTDSP1-210ENST00000491064 FEM1AQ9BSK4 669 aa14□□□□□ -0.17
CTDSP1-210ENST00000491064 TRIM4Q9C037 500 aa14□□□□□ -0.17
CTDSP1-210ENST00000491064 GPR27Q9NS67 375 aa14□□□□□ -0.17
CTDSP1-210ENST00000491064 ZFR2Q9UPR6 939 aaKnown RBP14□□□□□ -0.17
CTDSP1-210ENST00000491064 CPED1A4D0V7 1026 aa13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 EME2A4GXA9 379 aaPredicted RBP13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 A6NNZ2 444 aa13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 KPNA3O00505 521 aaPredicted RBP13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 PITX1P78337 314 aaPredicted RBP13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 EIF4EBP2Q13542 120 aaPredicted RBP13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 ZSCAN23Q3MJ62 389 aa13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 RABGAP1LQ5R372 815 aa13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 OR6B2Q6IFH4 312 aa13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 RBM44Q6ZP01 1051 aaKnown RBP13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 Q6ZSR6 202 aa13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 EFL1Q7Z2Z2 1120 aaKnown RBP13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 PTAR1Q7Z6K3 402 aaPredicted RBP13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 CLEC14AQ86T13 490 aa13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 DCP2Q8IU60 420 aaKnown RBP13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 SMYD4Q8IYR2 804 aaPredicted RBP13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 TPCN2Q8NHX9 752 aa13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 FAM174AQ8TBP5 190 aa13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 KAT5Q92993 513 aa13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 ARRDC3Q96B67 414 aa13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 PPP1R9BQ96SB3 815 aa13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 TRIM62Q9BVG3 475 aa13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 FAM117AQ9C073 453 aa13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 ST7Q9NRC1 585 aa13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.99□□□□□ -0.171e-8■■■■■ 33.1
CTDSP1-210ENST00000491064 OR51B4Q9Y5P0 310 aa13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 HEMK1Q9Y5R4 338 aaPredicted RBP13.99□□□□□ -0.17
CTDSP1-210ENST00000491064 RNF103O00237 685 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 TERTO14746 1132 aaKnown RBP13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 SLC16A3O15427 465 aaKnown RBP13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 TCEA3O75764 348 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 PCDH8O95206 1070 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 CSF2P04141 144 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 NME1P15531 152 aaKnown RBP13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 CHRNA3P32297 505 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 MLLT3P42568 568 aaPredicted RBP13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 GPD2P43304 727 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 SYKP43405 635 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 IRAK1P51617 712 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 CENPCQ03188 943 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 CCDC15Q0P6D6 951 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 FZD2Q14332 565 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 TMEM259Q4ZIN3 620 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 SEL1L3Q68CR1 1132 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 FBXL22Q6P050 247 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 FOXR1Q6PIV2 292 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 CRTC1Q6UUV9 634 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 ARL14Q8N4G2 192 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 TMIEQ8NEW7 156 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 WDR36Q8NI36 951 aaKnown RBP13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 SLC35C1Q96A29 364 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 BMFQ96LC9 184 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 CCNL2Q96S94 520 aaPredicted RBP13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 POPDC2Q9HBU9 364 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 NCKIPSDQ9NZQ3 722 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 SLC12A6Q9UHW9 1150 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 VPS28Q9UK41 221 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 HS3ST2Q9Y278 367 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 HS3ST3A1Q9Y663 406 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 CSNK1G3Q9Y6M4 447 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 FLNCQ14315 2725 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 RELNP78509 3460 aa13.98□□□□□ -0.17
CTDSP1-210ENST00000491064 SPTY2D1-AS1A0A0U1RR47 76 aa13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 POM121BA6NF01 834 aa13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 RIOK3O14730 519 aaKnown RBP13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 EFSO43281 561 aa13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 TNFSF15O95150 251 aa13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 MT-CO1P00395 513 aa13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 SRCP12931 536 aa13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 ACADSBP45954 432 aa13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 NDUFA8P51970 172 aa13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 PDX1P52945 283 aa13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 DRAP1Q14919 205 aaPredicted RBP13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 LINC00303Q3SY05 128 aa13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 PERM1Q5SV97 790 aa13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 KYAT3Q6YP21 454 aaKnown RBP13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 ERN2Q76MJ5 926 aaKnown RBP13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 PARGQ86W56 976 aa13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 LURAP1LQ8IV03 231 aa13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 PPM1KQ8N3J5 372 aa13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 OR2A12Q8NGT7 310 aa13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 RNF34Q969K3 372 aa13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 RPRD1AQ96P16 312 aaPredicted RBP13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 NT5C1BQ96P26 610 aa13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 DYRK4Q9NR20 520 aa13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 KLF15Q9UIH9 416 aa13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 SALL4Q9UJQ4 1053 aa13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 ATXN7L1Q9ULK2 861 aaPredicted RBP13.97□□□□□ -0.17
CTDSP1-210ENST00000491064 FARP1Q9Y4F1 1045 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms