RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 VAV1P15498 845 aa19■□□□□ 0.63
MCF2L-230ENST00000491028 GLDCP23378 1020 aa19■□□□□ 0.63
MCF2L-230ENST00000491028 VASPP50552 380 aaPredicted RBP19■□□□□ 0.63
MCF2L-230ENST00000491028 GALK1P51570 392 aa19■□□□□ 0.63
MCF2L-230ENST00000491028 IFI35P80217 286 aaPredicted RBP19■□□□□ 0.63
MCF2L-230ENST00000491028 ECT2LQ008S8 904 aa19■□□□□ 0.63
MCF2L-230ENST00000491028 PRKCQQ04759 706 aa19■□□□□ 0.63
MCF2L-230ENST00000491028 C2orf54Q08AI8 447 aa19■□□□□ 0.63
MCF2L-230ENST00000491028 HNRNPDQ14103 355 aaKnown RBP19■□□□□ 0.63
MCF2L-230ENST00000491028 INO80DQ53TQ3 878 aaPredicted RBP19■□□□□ 0.63
MCF2L-230ENST00000491028 TMEM215Q68D42 235 aa19■□□□□ 0.63
MCF2L-230ENST00000491028 NAIF1Q69YI7 327 aaPredicted RBP19■□□□□ 0.63
MCF2L-230ENST00000491028 TTC27Q6P3X3 843 aa19■□□□□ 0.63
MCF2L-230ENST00000491028 TXNDC11Q6PKC3 985 aa19■□□□□ 0.63
MCF2L-230ENST00000491028 TPRG1Q6ZUI0 275 aa19■□□□□ 0.63
MCF2L-230ENST00000491028 ATL2Q8NHH9 583 aa19■□□□□ 0.63
MCF2L-230ENST00000491028 UCMAQ8WVF2 138 aa19■□□□□ 0.63
MCF2L-230ENST00000491028 CCDC114Q96M63 670 aa19■□□□□ 0.63
MCF2L-230ENST00000491028 VAT1Q99536 393 aa19■□□□□ 0.63
MCF2L-230ENST00000491028 TMEM121Q9BTD3 319 aa19■□□□□ 0.63
MCF2L-230ENST00000491028 CIPCQ9C0C6 399 aa19■□□□□ 0.63
MCF2L-230ENST00000491028 DDX47Q9H0S4 455 aaKnown RBP19■□□□□ 0.63
MCF2L-230ENST00000491028 RRAGDQ9NQL2 400 aaPredicted RBP19■□□□□ 0.63
MCF2L-230ENST00000491028 HAUS2Q9NVX0 235 aa19■□□□□ 0.63
MCF2L-230ENST00000491028 ELOVL2Q9NXB9 296 aa19■□□□□ 0.63
MCF2L-230ENST00000491028 WNT16Q9UBV4 365 aa19■□□□□ 0.63
MCF2L-230ENST00000491028 PCYOX1Q9UHG3 505 aa19■□□□□ 0.63
MCF2L-230ENST00000491028 MUC22E2RYF6 1773 aaPredicted RBP19■□□□□ 0.63
MCF2L-230ENST00000491028 TBC1D3BA6NDS4 549 aa18.99■□□□□ 0.63
MCF2L-230ENST00000491028 PRRT4C9JH25 899 aa18.99■□□□□ 0.63
MCF2L-230ENST00000491028 KCNN4O15554 427 aa18.99■□□□□ 0.63
MCF2L-230ENST00000491028 SRPRAP08240 638 aaKnown RBP18.99■□□□□ 0.63
MCF2L-230ENST00000491028 DLDP09622 509 aaKnown RBP18.99■□□□□ 0.63
MCF2L-230ENST00000491028 DRD1P21728 446 aa18.99■□□□□ 0.63
MCF2L-230ENST00000491028 TNFRSF4P43489 277 aa18.99■□□□□ 0.63
MCF2L-230ENST00000491028 RENBPP51606 427 aa18.99■□□□□ 0.63
MCF2L-230ENST00000491028 CLCN6P51797 869 aa18.99■□□□□ 0.63
MCF2L-230ENST00000491028 MESP2Q0VG99 397 aa18.99■□□□□ 0.63
MCF2L-230ENST00000491028 TMEM196Q5HYL7 178 aa18.99■□□□□ 0.63
MCF2L-230ENST00000491028 CCDC105Q8IYK2 499 aa18.99■□□□□ 0.63
MCF2L-230ENST00000491028 BBS5Q8N3I7 341 aa18.99■□□□□ 0.63
MCF2L-230ENST00000491028 KDM1BQ8NB78 822 aa18.99■□□□□ 0.63
MCF2L-230ENST00000491028 SLCO2A1Q92959 643 aa18.99■□□□□ 0.63
MCF2L-230ENST00000491028 RTP4Q96DX8 246 aa18.99■□□□□ 0.63
MCF2L-230ENST00000491028 CARD6Q9BX69 1037 aa18.99■□□□□ 0.63
MCF2L-230ENST00000491028 ARHGEF3Q9NR81 526 aa18.99■□□□□ 0.63
MCF2L-230ENST00000491028 AMACRQ9UHK6 382 aa18.99■□□□□ 0.63
MCF2L-230ENST00000491028 HS3ST2Q9Y278 367 aa18.99■□□□□ 0.63
MCF2L-230ENST00000491028 GAS8O95995 478 aa18.98■□□□□ 0.63
MCF2L-230ENST00000491028 CCNB1P14635 433 aa18.98■□□□□ 0.63
MCF2L-230ENST00000491028 KCNJ1P48048 391 aa18.98■□□□□ 0.63
MCF2L-230ENST00000491028 SERPINH1P50454 418 aaKnown RBP18.98■□□□□ 0.63
MCF2L-230ENST00000491028 GRSF1Q12849 480 aaKnown RBP eCLIP18.98■□□□□ 0.63
MCF2L-230ENST00000491028 DHX34Q14147 1143 aaKnown RBP18.98■□□□□ 0.63
MCF2L-230ENST00000491028 LBRQ14739 615 aaKnown RBP18.98■□□□□ 0.63
MCF2L-230ENST00000491028 PON2Q15165 354 aa18.98■□□□□ 0.63
MCF2L-230ENST00000491028 MARC1Q5VT66 337 aa18.98■□□□□ 0.63
MCF2L-230ENST00000491028 KLHL7Q8IXQ5 586 aa18.98■□□□□ 0.63
MCF2L-230ENST00000491028 TEX26Q8N6G2 289 aa18.98■□□□□ 0.63
MCF2L-230ENST00000491028 ALLCQ8N6M5 410 aa18.98■□□□□ 0.63
MCF2L-230ENST00000491028 LRRN4Q8WUT4 740 aa18.98■□□□□ 0.63
MCF2L-230ENST00000491028 FAM3CQ92520 227 aa18.98■□□□□ 0.63
MCF2L-230ENST00000491028 IL12RB2Q99665 862 aa18.98■□□□□ 0.63
MCF2L-230ENST00000491028 COL25A1Q9BXS0 654 aaPredicted RBP18.98■□□□□ 0.63
MCF2L-230ENST00000491028 USP29Q9HBJ7 922 aa18.98■□□□□ 0.63
MCF2L-230ENST00000491028 ERVW-1Q9UQF0 538 aa18.98■□□□□ 0.63
MCF2L-230ENST00000491028 STARD13Q9Y3M8 1113 aa18.98■□□□□ 0.63
MCF2L-230ENST00000491028 C5orf60A6NFR6 353 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 SGK1O00141 431 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 KCNK1O00180 336 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 RNF103O00237 685 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 NEBLO76041 1014 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 ECEL1O95672 775 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 CD160O95971 181 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 PTPN3P26045 913 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 HSPA9P38646 679 aaKnown RBP18.97■□□□□ 0.63
MCF2L-230ENST00000491028 NNMTP40261 264 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 CTSOP43234 321 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-230ENST00000491028 NUMBP49757 651 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 WASHC5Q12768 1159 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 ZNF235Q14590 738 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 P3H1Q32P28 736 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 IER5LQ5T953 404 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 LINGO4Q6UY18 593 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 ZNF852Q6ZMS4 543 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 B4GALNT4Q76KP1 1039 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 GSTA5Q7RTV2 222 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 MMGT1Q8N4V1 131 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 SH2D3CQ8N5H7 860 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 CCDC26Q8TAB7 109 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 SHDQ96IW2 340 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 KRT12Q99456 494 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 CEP44Q9C0F1 390 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 C10orf88Q9H8K7 445 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 FBRSL1Q9HCM7 1045 aaKnown RBP18.97■□□□□ 0.63
MCF2L-230ENST00000491028 SEPT10Q9P0V9 454 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 SEPT3Q9UH03 358 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 FBXL21Q9UKT6 434 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 TRHDEQ9UKU6 1024 aa18.97■□□□□ 0.63
MCF2L-230ENST00000491028 SHISA7A6NL88 538 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms