RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 TMCC2O75069 709 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 TNFAIP8O95379 198 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 CRTAMO95727 393 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 FAM58BPP0C7Q3 252 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 LCP1P13796 627 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 CYP2F1P24903 491 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 ADORA2AP29274 412 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 KCNJ8Q15842 424 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 CCDC142Q17RM4 750 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 AGAP9Q5VTM2 703 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 IER5Q5VY09 327 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 KCNT2Q6UVM3 1135 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 MAMSTRQ6ZN01 415 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 ERI1Q8IV48 349 aaKnown RBP10.35□□□□□ -0.75
BRD9-209ENST00000490814 PQLC1Q8N2U9 271 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 PCDH19Q8TAB3 1148 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 BRI3BPQ8WY22 251 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 CMTM5Q96DZ9 223 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 PCYT2Q99447 389 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 CAAP1Q9H8G2 361 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 ZNF358Q9NW07 568 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 AP3B1O00203 1094 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 USP12O75317 370 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 FARP2O94887 1054 aaPredicted RBP10.35□□□□□ -0.75
BRD9-209ENST00000490814 STAG3L1P0CL83 205 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 ADORA2BP29275 332 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 S100A5P33763 92 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 SERPINB5P36952 375 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 EML3Q32P44 896 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 HSDL1Q3SXM5 330 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 FAM91A1Q658Y4 838 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 NXNQ6DKJ4 435 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 EFCAB12Q6NXP0 572 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 CENPSQ8N2Z9 138 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 ACMSDQ8TDX5 336 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 MED30Q96HR3 178 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 LPIN3Q9BQK8 851 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 CDT1Q9H211 546 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 C1orf21Q9H246 121 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 SIAEQ9HAT2 523 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 VPS51Q9UID3 782 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 GNEQ9Y223 722 aaKnown RBP10.35□□□□□ -0.75
BRD9-209ENST00000490814 SBF1O95248 1867 aa10.35□□□□□ -0.75
BRD9-209ENST00000490814 MYO18AQ92614 2054 aaKnown RBP10.35□□□□□ -0.75
BRD9-209ENST00000490814 KLF11O14901 512 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 DNAJA2O60884 412 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 MAFO75444 373 aaPredicted RBP10.34□□□□□ -0.75
BRD9-209ENST00000490814 HSPA4LO95757 839 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 FOSL1P15407 271 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 TFE3P19532 575 aaPredicted RBP10.34□□□□□ -0.75
BRD9-209ENST00000490814 PKNOX1P55347 436 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 CD300CQ08708 224 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 MXD4Q14582 209 aaPredicted RBP10.34□□□□□ -0.75
BRD9-209ENST00000490814 SF3B4Q15427 424 aaKnown RBP eCLIP10.34□□□□□ -0.752e-20■■■■■ 29
BRD9-209ENST00000490814 FRMD7Q6ZUT3 714 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 CMC1Q7Z7K0 106 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 C10orf107Q8IVU9 208 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 UBR7Q8N806 425 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 OR6B3Q8NGW1 331 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 FNIP1Q8TF40 1166 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 OSCP1Q8WVF1 389 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 COPS5Q92905 334 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 USP13Q92995 863 aaPredicted RBP10.34□□□□□ -0.75
BRD9-209ENST00000490814 BTBD9Q96Q07 612 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 KCNK16Q96T55 309 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 LHX5Q9H2C1 402 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 MINDY3Q9H8M7 445 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 KLHL3Q9UH77 587 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 SIX4Q9UIU6 781 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 LINC00854A0A1B0GVQ3 168 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 CCNT2O60583 730 aaKnown RBP10.34□□□□□ -0.75
BRD9-209ENST00000490814 ERVK-10P10266 1014 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 AOC1P19801 751 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 MGAT1P26572 445 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 GPD2P43304 727 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 NUDT2P50583 147 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 XIAPP98170 497 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 FLOT2Q14254 428 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 NRF1Q16656 503 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 BOLA3Q53S33 107 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 DCAF6Q58WW2 860 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 TRNP1Q6NT89 227 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 CDKL3Q8IVW4 592 aaPredicted RBP10.34□□□□□ -0.75
BRD9-209ENST00000490814 PHTF2Q8N3S3 785 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 FBXW8Q8N3Y1 598 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 MOCOSQ96EN8 888 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 SPATA33Q96N06 139 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 LGMNQ99538 433 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 EBNA1BP2Q99848 306 aaKnown RBP10.34□□□□□ -0.75
BRD9-209ENST00000490814 MRPS26Q9BYN8 205 aaKnown RBP10.34□□□□□ -0.75
BRD9-209ENST00000490814 ARHGAP26Q9UNA1 814 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 PCDHGA3Q9Y5H0 932 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 RBBP6Q7Z6E9 1792 aaKnown RBP10.34□□□□□ -0.75
BRD9-209ENST00000490814 GPR25O00155 361 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 ENO3P13929 434 aaPredicted RBP10.34□□□□□ -0.75
BRD9-209ENST00000490814 ITGAXP20702 1163 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 CDH5P33151 784 aaPredicted RBP10.34□□□□□ -0.75
BRD9-209ENST00000490814 ENPEPQ07075 957 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 TTC23LQ6PF05 361 aa10.34□□□□□ -0.75
BRD9-209ENST00000490814 POTEHQ6S545 545 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms