RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 TRPC5OSA6NMA1 111 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 TK2O00142 265 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 RFPL1O75677 317 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 PGGT1BP53609 377 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 MRPS5P82675 430 aaKnown RBP11.69□□□□□ -0.54
PCSK9-202ENST00000490692 UBE3AQ05086 875 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 PTP4A2Q12974 167 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 CSHL1Q14406 222 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 ZBED5Q49AG3 693 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 SAMD4BQ5PRF9 694 aaKnown RBP11.69□□□□□ -0.54
PCSK9-202ENST00000490692 SH3PXD2AQ5TCZ1 1133 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 SCARA3Q6AZY7 606 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 GATAD2AQ86YP4 633 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 MAP4K3Q8IVH8 894 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 OR7A2PQ8NGA2 310 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 DNAJB14Q8TBM8 379 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 DDX1Q92499 740 aaKnown RBP11.69□□□□□ -0.54
PCSK9-202ENST00000490692 FBXL20Q96IG2 436 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 GATA5Q9BWX5 397 aaPredicted RBP11.69□□□□□ -0.54
PCSK9-202ENST00000490692 SENP6Q9GZR1 1112 aaPredicted RBP11.69□□□□□ -0.54
PCSK9-202ENST00000490692 STN1Q9H668 368 aaKnown RBP11.69□□□□□ -0.54
PCSK9-202ENST00000490692 EPS8L2Q9H6S3 715 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 CHD4Q14839 1912 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 COL16A1Q07092 1604 aaPredicted RBP11.69□□□□□ -0.54
PCSK9-202ENST00000490692 SNPHO15079 494 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 RAD51BO15315 384 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 IDH3BO43837 385 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 HDCP19113 662 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 CHRNA5P30532 468 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 KPNA2P52292 529 aaKnown RBP11.69□□□□□ -0.54
PCSK9-202ENST00000490692 MS4A2Q01362 244 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 CEACAM7Q14002 265 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 HNRNPDQ14103 355 aaKnown RBP11.69□□□□□ -0.54
PCSK9-202ENST00000490692 IKBKEQ14164 716 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 PGAM4Q8N0Y7 254 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 IL31RAQ8NI17 732 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 CANT1Q8WVQ1 401 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 TUBGCP3Q96CW5 907 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 C9orf16Q9BUW7 83 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 ZC4H2Q9NQZ6 224 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 MKS1Q9NXB0 559 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 PLK2Q9NYY3 685 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 POLLQ9UGP5 575 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 PCDHAC2Q9Y5I4 1007 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 SPO11Q9Y5K1 396 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 COL4A1P02462 1669 aa11.69□□□□□ -0.54
PCSK9-202ENST00000490692 DHRS12A0PJE2 317 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 KLF11O14901 512 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 PFDN6O15212 129 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 COL6A2P12110 1019 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 TFEBP19484 476 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 S100A5P33763 92 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 TTKP33981 857 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 BAG6P46379 1132 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 COPZ1P61923 177 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 ZACNQ401N2 412 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 SLC2A7Q6PXP3 512 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 CRTC3Q6UUV7 619 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 KBTBD6Q86V97 674 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 TERB1Q8NA31 727 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 RNF149Q8NC42 400 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 SHCBP1Q8NEM2 672 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 KCTD4Q8WVF5 259 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 DEPDC7Q96QD5 511 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 FRMD8P1Q9BZ68 369 aaPredicted RBP11.68□□□□□ -0.54
PCSK9-202ENST00000490692 DNAI2Q9GZS0 605 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 HIPK3Q9H422 1215 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 ZDHHC7Q9NXF8 308 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 SCHIP1Q9P0W5 487 aaPredicted RBP11.68□□□□□ -0.54
PCSK9-202ENST00000490692 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.68□□□□□ -0.54
PCSK9-202ENST00000490692 TNPO2O14787 897 aaKnown RBP11.68□□□□□ -0.54
PCSK9-202ENST00000490692 DENRO43583 198 aaKnown RBP11.68□□□□□ -0.54
PCSK9-202ENST00000490692 LDLRP01130 860 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 ITGB5P18084 799 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 VARSP26640 1264 aaKnown RBP11.68□□□□□ -0.54
PCSK9-202ENST00000490692 CAPRIN1Q14444 709 aaKnown RBP11.68□□□□□ -0.54
PCSK9-202ENST00000490692 BOLA3Q53S33 107 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 RWDD4Q6NW29 188 aaKnown RBP11.68□□□□□ -0.54
PCSK9-202ENST00000490692 PDZD4Q76G19 769 aaPredicted RBP11.68□□□□□ -0.54
PCSK9-202ENST00000490692 RAB44Q7Z6P3 723 aaPredicted RBP11.68□□□□□ -0.54
PCSK9-202ENST00000490692 SFRP1Q8N474 314 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 OR52K1Q8NGK4 314 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 SLC10A4Q96EP9 437 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 VPS39Q96JC1 886 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 LGMNQ99538 433 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 CNPY3Q9BT09 278 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 CHID1Q9BWS9 393 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 ZNF696Q9H7X3 374 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 SPAG4Q9NPE6 437 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 TEKT2Q9UIF3 430 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 RGS5O15539 181 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 SEC24AO95486 1093 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 GFAPP14136 432 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 TCEA1P23193 301 aaKnown RBP11.68□□□□□ -0.54
PCSK9-202ENST00000490692 IL5RAQ01344 420 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 NSUN2Q08J23 767 aaKnown RBP eCLIP11.68□□□□□ -0.54
PCSK9-202ENST00000490692 EMC2Q15006 297 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 AKAP14Q86UN6 197 aa11.68□□□□□ -0.54
PCSK9-202ENST00000490692 APOBEC3GQ9HC16 384 aaKnown RBP11.68□□□□□ -0.54
PCSK9-202ENST00000490692 DNAJC28Q9NX36 388 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms