RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 SH3BP5O60239 455 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 PAGE1O75459 146 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 GJB3O75712 270 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 GFPT2O94808 682 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 IGLV3-19P01714 112 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 APOEP02649 317 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 ACADMP11310 421 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 UCHL3P15374 230 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 CSRP1P21291 193 aaKnown RBP7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 CDH5P33151 784 aaPredicted RBP7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 CSNK1EP49674 416 aaKnown RBP7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 COPB1P53618 953 aaKnown RBP7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 GFPT1Q06210 699 aaPredicted RBP7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 SEMA3BQ13214 749 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 AUHQ13825 339 aaKnown RBP7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 DOC2BQ14184 412 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 NCAPHQ15003 741 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 MEA1Q16626 185 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 PLEKHG6Q3KR16 790 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 ALFQ53S48 1182 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 EFHC1Q5JVL4 640 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 PRAMEF14Q5SWL7 426 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 CDKAL1Q5VV42 579 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 DAB2IPQ5VWQ8 1189 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 CXorf57Q6NSI4 855 aaKnown RBP7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 RBM43Q6ZSC3 357 aaKnown RBP7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 XYLT1Q86Y38 959 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 MMAAQ8IVH4 418 aaKnown RBP7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 ZNF683Q8IZ20 524 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 ZNF295-AS1Q8N0V1 137 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 CCAR2Q8N163 923 aaKnown RBP7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 STK40Q8N2I9 435 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 MINDY1Q8N5J2 469 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 SLC30A5Q8TAD4 765 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 RNF34Q969K3 372 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 TRIM11Q96F44 468 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 BTN2A3PQ96KV6 586 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 NPY6RQ99463 290 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 DDX50Q9BQ39 737 aaKnown RBP7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 ORAI3Q9BRQ5 295 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 NUP58Q9BVL2 599 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 STK33Q9BYT3 514 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 NEUROG2Q9H2A3 272 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 HSD3B7Q9H2F3 369 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 FAM204AQ9H8W3 233 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 PIGVQ9NUD9 493 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 ASNSD1Q9NWL6 643 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 KIAA1522Q9P206 1035 aaPredicted RBP7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 VANGL2Q9ULK5 521 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 OR51B4Q9Y5P0 310 aa7.54□□□□□ -1.2
PRPF4B-208ENST00000490653 A0A1B0GVT2 93 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 A0A1W2PP55 124 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 FAM221BA6H8Z2 402 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 FAM47DPA6NHR8 397 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 MEI4A8MW99 385 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 F5H5T6 163 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 NPC1O15118 1278 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 SART1O43290 800 aaKnown RBP7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 SNAP91O60641 907 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 HSF2BPO75031 334 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 DAB1O75553 588 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 MT-CO1P00395 513 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 ATP5BP06576 529 aaKnown RBP7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 GLI1P08151 1106 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 CEACAM1P13688 526 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 CD33P20138 364 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 OXTRP30559 389 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 NOS2P35228 1153 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 FLT3P36888 993 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 ANP32AP39687 249 aaKnown RBP7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 GABRB2P47870 512 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 SULT1E1P49888 294 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 GALCP54803 685 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 GDF10P55107 478 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 ZNF445P59923 1031 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 POLR2FP61218 127 aaKnown RBP7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 NOMO3P69849 1222 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 ECT2LQ008S8 904 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 FMO1Q01740 532 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 GRIK2Q13002 908 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 CDH18Q13634 790 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 HNRNPA1L2Q32P51 320 aaKnown RBP7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 POM121L1PQ3SYA9 428 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 NAA35Q5VZE5 725 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 SLC26A9Q7LBE3 791 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 APTXQ7Z2E3 356 aaKnown RBP7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 ERICH1Q86X53 443 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 DNAAF5Q86Y56 855 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 FAM114A1Q8IWE2 563 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 EMC1Q8N766 993 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 ZNF397Q8NF99 534 aaPredicted RBP7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 JOSD2Q8TAC2 188 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 CEP76Q8TAP6 659 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 FRS2Q8WU20 508 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 ZCCHC14Q8WYQ9 949 aaKnown RBP7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 SNX19Q92543 992 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 BIRC7Q96CA5 298 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 C18orf8Q96DM3 657 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 FAM81BQ96LP2 452 aa7.53□□□□□ -1.2
PRPF4B-208ENST00000490653 PSMB7Q99436 277 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms