RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 ANLNQ9NQW6 1124 aa16.27■□□□□ 0.2
PLOD3-216ENST00000489927 PIGVQ9NUD9 493 aa16.27■□□□□ 0.2
PLOD3-216ENST00000489927 UCKL1Q9NWZ5 548 aa16.27■□□□□ 0.2
PLOD3-216ENST00000489927 KNTC1P50748 2209 aa16.27■□□□□ 0.19
PLOD3-216ENST00000489927 MYLKQ15746 1914 aa16.26■□□□□ 0.19
PLOD3-216ENST00000489927 I6L893 689 aaPredicted RBP16.26■□□□□ 0.19
PLOD3-216ENST00000489927 RNF103O00237 685 aa16.26■□□□□ 0.19
PLOD3-216ENST00000489927 ADCY5O95622 1261 aa16.26■□□□□ 0.19
PLOD3-216ENST00000489927 FGFR1OPO95684 399 aaKnown RBP16.26■□□□□ 0.19
PLOD3-216ENST00000489927 DGKAP23743 735 aa16.26■□□□□ 0.19
PLOD3-216ENST00000489927 RRM1P23921 792 aa16.26■□□□□ 0.19
PLOD3-216ENST00000489927 CHRNA3P32297 505 aa16.26■□□□□ 0.19
PLOD3-216ENST00000489927 NOS2P35228 1153 aa16.26■□□□□ 0.19
PLOD3-216ENST00000489927 KRT83P78385 493 aa16.26■□□□□ 0.19
PLOD3-216ENST00000489927 SLC6A3Q01959 620 aa16.26■□□□□ 0.19
PLOD3-216ENST00000489927 ZNF284Q2VY69 593 aa16.26■□□□□ 0.19
PLOD3-216ENST00000489927 NEK5Q6P3R8 708 aa16.26■□□□□ 0.19
PLOD3-216ENST00000489927 GBP6Q6ZN66 633 aa16.26■□□□□ 0.19
PLOD3-216ENST00000489927 SLC26A9Q7LBE3 791 aa16.26■□□□□ 0.19
PLOD3-216ENST00000489927 CREBRFQ8IUR6 639 aa16.26■□□□□ 0.19
PLOD3-216ENST00000489927 OR13H1Q8NG92 308 aa16.26■□□□□ 0.19
PLOD3-216ENST00000489927 OR4C6Q8NH72 309 aa16.26■□□□□ 0.19
PLOD3-216ENST00000489927 ARRDC3Q96B67 414 aa16.26■□□□□ 0.19
PLOD3-216ENST00000489927 C2orf49Q9BVC5 232 aaPredicted RBP16.26■□□□□ 0.19
PLOD3-216ENST00000489927 TKTL2Q9H0I9 626 aa16.26■□□□□ 0.19
PLOD3-216ENST00000489927 KLHL11Q9NVR0 708 aa16.26■□□□□ 0.19
PLOD3-216ENST00000489927 VPS51Q9UID3 782 aa16.26■□□□□ 0.19
PLOD3-216ENST00000489927 ARID1BQ8NFD5 2236 aaPredicted RBP16.25■□□□□ 0.19
PLOD3-216ENST00000489927 ASXL3Q9C0F0 2248 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 FFAR2O15552 330 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 SMAD6O43541 496 aaKnown RBP16.25■□□□□ 0.19
PLOD3-216ENST00000489927 C1QL1O75973 258 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 MT-CO3P00414 261 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 RHOCP08134 193 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 GIMD1P0DJR0 217 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 TFE3P19532 575 aaPredicted RBP16.25■□□□□ 0.19
PLOD3-216ENST00000489927 DAB2P98082 770 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 E2F1Q01094 437 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 PTPN20Q4JDL3 420 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 LINGO4Q6UY18 593 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 KDM7AQ6ZMT4 941 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 HORMAD1Q86X24 394 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 ZNF683Q8IZ20 524 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 CHST14Q8NCH0 376 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 TMIEQ8NEW7 156 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 SLC39A7Q92504 469 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 CCDC114Q96M63 670 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 NPY6RQ99463 290 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 CALN1Q9BXU9 219 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 SYNCQ9H7C4 482 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 PLCB1Q9NQ66 1216 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 ARHGEF38Q9NXL2 777 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 AJAP1Q9UKB5 411 aaPredicted RBP16.25■□□□□ 0.19
PLOD3-216ENST00000489927 FARP1Q9Y4F1 1045 aaPredicted RBP16.25■□□□□ 0.19
PLOD3-216ENST00000489927 PCDHB1Q9Y5F3 818 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 SNX10Q9Y5X0 201 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 DOCK9Q9BZ29 2069 aa16.25■□□□□ 0.19
PLOD3-216ENST00000489927 A0A0D9SEW6 157 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 TK2O00142 265 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 ATXN7O15265 892 aaPredicted RBP16.24■□□□□ 0.19
PLOD3-216ENST00000489927 HNRNPA2B1P22626 353 aaKnown RBP16.24■□□□□ 0.19
PLOD3-216ENST00000489927 PON1P27169 355 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 AKT2P31751 481 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 ACTN2P35609 894 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 CXCR3P49682 368 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 CLDN2P57739 230 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 PTK2Q05397 1052 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 CCDC15Q0P6D6 951 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 C19orf57Q0VDD7 668 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 EXOC3L4Q17RC7 722 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 TBC1D25Q3MII6 688 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 HS1BP3Q53T59 392 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 TMC6Q7Z403 805 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 TFAP2DQ7Z6R9 452 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 SLC47A2Q86VL8 602 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 ERICH1Q86X53 443 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 SLC22A18ASQ8N1D0 253 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 ZNF397Q8NF99 534 aaPredicted RBP16.24■□□□□ 0.19
PLOD3-216ENST00000489927 GRIN3AQ8TCU5 1115 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 TNKS2Q9H2K2 1166 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 WDCPQ9H6R7 721 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 DYRK4Q9NR20 520 aa16.24■□□□□ 0.19
PLOD3-216ENST00000489927 ZFR2Q9UPR6 939 aaKnown RBP16.24■□□□□ 0.19
PLOD3-216ENST00000489927 DRGXA6NNA5 263 aa16.23■□□□□ 0.19
PLOD3-216ENST00000489927 GADD45BO75293 160 aaPredicted RBP16.23■□□□□ 0.19
PLOD3-216ENST00000489927 PIAS2O75928 621 aa16.23■□□□□ 0.19
PLOD3-216ENST00000489927 PCDH8O95206 1070 aa16.23■□□□□ 0.19
PLOD3-216ENST00000489927 PRNPP04156 253 aa16.23■□□□□ 0.19
PLOD3-216ENST00000489927 PNMA6AP0CW24 399 aaPredicted RBP16.23■□□□□ 0.19
PLOD3-216ENST00000489927 CKMT1AP12532 417 aa16.23■□□□□ 0.19
PLOD3-216ENST00000489927 MYF5P13349 255 aa16.23■□□□□ 0.19
PLOD3-216ENST00000489927 CLCN1P35523 988 aa16.23■□□□□ 0.19
PLOD3-216ENST00000489927 KRT9P35527 623 aa16.23■□□□□ 0.19
PLOD3-216ENST00000489927 SULT1E1P49888 294 aa16.23■□□□□ 0.19
PLOD3-216ENST00000489927 CLCN6P51797 869 aa16.23■□□□□ 0.19
PLOD3-216ENST00000489927 SNX16P57768 344 aa16.23■□□□□ 0.19
PLOD3-216ENST00000489927 RNASE9P60153 205 aaKnown RBP16.23■□□□□ 0.19
PLOD3-216ENST00000489927 TLE3Q04726 772 aa16.23■□□□□ 0.19
PLOD3-216ENST00000489927 CCDC173Q0VFZ6 552 aa16.23■□□□□ 0.19
PLOD3-216ENST00000489927 ARSIQ5FYB1 569 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms