RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 CLCN6P51797 869 aa11.12□□□□□ -0.63
TFF3-203ENST00000489676 EIF3EP60228 445 aaKnown RBP11.12□□□□□ -0.63
TFF3-203ENST00000489676 ECT2LQ008S8 904 aa11.12□□□□□ -0.63
TFF3-203ENST00000489676 SULT2A1Q06520 285 aa11.12□□□□□ -0.63
TFF3-203ENST00000489676 IL10RBQ08334 325 aa11.12□□□□□ -0.63
TFF3-203ENST00000489676 ENPP2Q13822 863 aa11.12□□□□□ -0.63
TFF3-203ENST00000489676 TUBB2AQ13885 445 aa11.12□□□□□ -0.63
TFF3-203ENST00000489676 WHAMMP3Q1A5X7 153 aa11.12□□□□□ -0.63
TFF3-203ENST00000489676 TMCO4Q5TGY1 634 aa11.12□□□□□ -0.63
TFF3-203ENST00000489676 TTC27Q6P3X3 843 aa11.12□□□□□ -0.63
TFF3-203ENST00000489676 B4GALNT4Q76KP1 1039 aa11.12□□□□□ -0.63
TFF3-203ENST00000489676 ZC3H18Q86VM9 953 aaKnown RBP11.12□□□□□ -0.63
TFF3-203ENST00000489676 CDKL3Q8IVW4 592 aaPredicted RBP11.12□□□□□ -0.63
TFF3-203ENST00000489676 SIX5Q8N196 739 aa11.12□□□□□ -0.63
TFF3-203ENST00000489676 TFB1MQ8WVM0 346 aaKnown RBP11.12□□□□□ -0.63
TFF3-203ENST00000489676 SORCS1Q8WY21 1168 aa11.12□□□□□ -0.63
TFF3-203ENST00000489676 FAM3CQ92520 227 aa11.12□□□□□ -0.63
TFF3-203ENST00000489676 RTP4Q96DX8 246 aa11.12□□□□□ -0.63
TFF3-203ENST00000489676 ZNF599Q96NL3 588 aa11.12□□□□□ -0.63
TFF3-203ENST00000489676 SPON2Q9BUD6 331 aa11.12□□□□□ -0.63
TFF3-203ENST00000489676 TUBB2BQ9BVA1 445 aa11.12□□□□□ -0.63
TFF3-203ENST00000489676 AP1M1Q9BXS5 423 aa11.12□□□□□ -0.63
TFF3-203ENST00000489676 L2HGDHQ9H9P8 463 aa11.12□□□□□ -0.63
TFF3-203ENST00000489676 LTB4R2Q9NPC1 389 aa11.12□□□□□ -0.63
TFF3-203ENST00000489676 ARIH1Q9Y4X5 557 aaPredicted RBP11.12□□□□□ -0.63
TFF3-203ENST00000489676 ACTL7AQ9Y615 435 aa11.12□□□□□ -0.63
TFF3-203ENST00000489676 MYO18AQ92614 2054 aaKnown RBP11.12□□□□□ -0.63
TFF3-203ENST00000489676 TBC1D3BA6NDS4 549 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 K7ERQ8 282 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 KRIT1O00522 736 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 SMAD6O43541 496 aaKnown RBP11.11□□□□□ -0.63
TFF3-203ENST00000489676 TIMM44O43615 452 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 ATP9BO43861 1147 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 ZNF821O75541 412 aaPredicted RBP11.11□□□□□ -0.63
TFF3-203ENST00000489676 TMCC1O94876 653 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 SRPRAP08240 638 aaKnown RBP11.11□□□□□ -0.63
TFF3-203ENST00000489676 SRCP12931 536 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 HNRNPLP14866 589 aaKnown RBP eCLIP11.11□□□□□ -0.63
TFF3-203ENST00000489676 CD72P21854 359 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 RBL1P28749 1068 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 FNTAP49354 379 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 IFI35P80217 286 aaPredicted RBP11.11□□□□□ -0.63
TFF3-203ENST00000489676 WASHC5Q12768 1159 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 GRSF1Q12849 480 aaKnown RBP eCLIP11.11□□□□□ -0.63
TFF3-203ENST00000489676 ZBTB17Q13105 803 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 FZD5Q13467 585 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 BYSLQ13895 437 aaKnown RBP11.11□□□□□ -0.63
TFF3-203ENST00000489676 ZNF234Q14588 700 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 INO80DQ53TQ3 878 aaPredicted RBP11.11□□□□□ -0.63
TFF3-203ENST00000489676 EGFLAMQ63HQ2 1017 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 TIGD7Q6NT04 549 aaPredicted RBP11.11□□□□□ -0.63
TFF3-203ENST00000489676 RETSATQ6NUM9 610 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 LINGO4Q6UY18 593 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 CCDC13Q8IYE1 715 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 SH2D3CQ8N5H7 860 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 TEX26Q8N6G2 289 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 KDM1BQ8NB78 822 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 CYB5D2Q8WUJ1 264 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 CASKIN2Q8WXE0 1202 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 VOPP1Q96AW1 172 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 IL12RB2Q99665 862 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 CIPCQ9C0C6 399 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 C10orf88Q9H8K7 445 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 SP110Q9HB58 689 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 USP29Q9HBJ7 922 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 HOMER3Q9NSC5 361 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 RBM12Q9NTZ6 932 aaKnown RBP11.11□□□□□ -0.63
TFF3-203ENST00000489676 THAP10Q9P2Z0 257 aaPredicted RBP11.11□□□□□ -0.63
TFF3-203ENST00000489676 LHX3Q9UBR4 397 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 UBA2Q9UBT2 640 aaPredicted RBP11.11□□□□□ -0.63
TFF3-203ENST00000489676 FBXL21Q9UKT6 434 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 HPCAL4Q9UM19 191 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 ERVW-1Q9UQF0 538 aa11.11□□□□□ -0.63
TFF3-203ENST00000489676 KANSL1LA0AUZ9 987 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 H7C0C1 242 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 KCNK1O00180 336 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 MUSKO15146 869 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 DCXO43602 365 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 ATP5BP06576 529 aaKnown RBP11.1□□□□□ -0.63
TFF3-203ENST00000489676 ITGAVP06756 1048 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 CHRNB1P11230 501 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 PTPN3P26045 913 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 PAFAH1B1P43034 410 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 ATP5OP48047 213 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 NRLP54845 237 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 GDF10P55107 478 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 GEMIN4P57678 1058 aaKnown RBP11.1□□□□□ -0.63
TFF3-203ENST00000489676 SLC20A2Q08357 652 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 SIGLEC14Q08ET2 396 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 SLC10A7Q0GE19 358 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 AP1B1Q10567 949 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 SNX1Q13596 522 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 HNRNPDQ14103 355 aaKnown RBP11.1□□□□□ -0.63
TFF3-203ENST00000489676 RFTN1Q14699 578 aaPredicted RBP11.1□□□□□ -0.63
TFF3-203ENST00000489676 EMC10Q5UCC4 262 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 HEATR6Q6AI08 1181 aaKnown RBP11.1□□□□□ -0.63
TFF3-203ENST00000489676 ALG1LQ6GMV1 187 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 C22orf39Q6P5X5 142 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 ZNF852Q6ZMS4 543 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 LEKR1Q6ZMV7 388 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms