RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 ANKRD20A1Q5TYW2 823 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 ANKRD20A3Q5VUR7 823 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 DUPD1Q68J44 220 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 ZNF567Q8N184 647 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 PHTF2Q8N3S3 785 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 SLC44A3Q8N4M1 653 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 WFIKKN2Q8TEU8 576 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 RUBCNQ92622 972 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 CHFRQ96EP1 664 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 SPON2Q9BUD6 331 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 C2orf49Q9BVC5 232 aaPredicted RBP16.34■□□□□ 0.21
CLDN11-208ENST00000488989 BRD9Q9H8M2 597 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 ANKZF1Q9H8Y5 726 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 PRDM6Q9NQX0 595 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 DNAJC17Q9NVM6 304 aaKnown RBP16.34■□□□□ 0.21
CLDN11-208ENST00000488989 GTSE1Q9NYZ3 720 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 PAK5Q9P286 719 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 LIMD1Q9UGP4 676 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 VPS28Q9UK41 221 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 TRHDEQ9UKU6 1024 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 HPCAL4Q9UM19 191 aa16.34■□□□□ 0.21
CLDN11-208ENST00000488989 SNAP91O60641 907 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 CD160O95971 181 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 JCHAINP01591 159 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 ZSCAN5DPP0CG00 497 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 ETS1P14921 441 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 GLDCP23378 1020 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 OPRD1P41143 372 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 DGKGP49619 791 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 VASPP50552 380 aaPredicted RBP16.33■□□□□ 0.2
CLDN11-208ENST00000488989 RENBPP51606 427 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 SLC7A5Q01650 507 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 SLC20A2Q08357 652 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 ERCC6LQ2NKX8 1250 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 FUT11Q495W5 492 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 INO80DQ53TQ3 878 aaPredicted RBP16.33■□□□□ 0.2
CLDN11-208ENST00000488989 PRUNE1Q86TP1 453 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 ADIPOR2Q86V24 386 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 AHI1Q8N157 1196 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 CNTD1Q8N815 330 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 NAT16Q8N8M0 369 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 CCDC110Q8TBZ0 833 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 NSMCE1Q8WV22 266 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 CASKIN2Q8WXE0 1202 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 DNASE1L2Q92874 299 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 TTC17Q96AE7 1141 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 ZNF419Q96HQ0 510 aaPredicted RBP16.33■□□□□ 0.2
CLDN11-208ENST00000488989 TEKT5Q96M29 485 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 PRKAG3Q9UGI9 489 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 VPS51Q9UID3 782 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 ATP8A1Q9Y2Q0 1164 aa16.33■□□□□ 0.2
CLDN11-208ENST00000488989 UTP11Q9Y3A2 253 aaKnown RBP16.33■□□□□ 0.2
CLDN11-208ENST00000488989 ANKRD36A6QL64 1941 aa16.32■□□□□ 0.2
CLDN11-208ENST00000488989 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.32■□□□□ 0.2
CLDN11-208ENST00000488989 MUC22E2RYF6 1773 aaPredicted RBP16.32■□□□□ 0.2
CLDN11-208ENST00000488989 CBX4O00257 560 aa16.32■□□□□ 0.2
CLDN11-208ENST00000488989 TRIM24O15164 1050 aa16.32■□□□□ 0.2
CLDN11-208ENST00000488989 RHOXF2BP0C7M4 288 aa16.32■□□□□ 0.2
CLDN11-208ENST00000488989 ACTN2P35609 894 aa16.32■□□□□ 0.2
CLDN11-208ENST00000488989 SLC6A11P48066 632 aa16.32■□□□□ 0.2
CLDN11-208ENST00000488989 GEMIN4P57678 1058 aaKnown RBP16.32■□□□□ 0.2
CLDN11-208ENST00000488989 SULT2A1Q06520 285 aa16.32■□□□□ 0.2
CLDN11-208ENST00000488989 SLC10A7Q0GE19 358 aa16.32■□□□□ 0.2
CLDN11-208ENST00000488989 LBRQ14739 615 aaKnown RBP16.32■□□□□ 0.2
CLDN11-208ENST00000488989 GEN1Q17RS7 908 aa16.32■□□□□ 0.2
CLDN11-208ENST00000488989 MARC1Q5VT66 337 aa16.32■□□□□ 0.2
CLDN11-208ENST00000488989 GRAMD4Q6IC98 578 aa16.32■□□□□ 0.2
CLDN11-208ENST00000488989 ZNF354CQ86Y25 554 aa16.32■□□□□ 0.2
CLDN11-208ENST00000488989 KLHDC8BQ8IXV7 354 aa16.32■□□□□ 0.2
CLDN11-208ENST00000488989 GPR161Q8N6U8 529 aaKnown RBP16.32■□□□□ 0.2
CLDN11-208ENST00000488989 RHOXF2Q9BQY4 288 aa16.32■□□□□ 0.2
CLDN11-208ENST00000488989 GDF3Q9NR23 364 aa16.32■□□□□ 0.2
CLDN11-208ENST00000488989 SEPT10Q9P0V9 454 aa16.32■□□□□ 0.2
CLDN11-208ENST00000488989 THEGQ9P2T0 379 aa16.32■□□□□ 0.2
CLDN11-208ENST00000488989 DEC1Q9P2X7 70 aa16.32■□□□□ 0.2
CLDN11-208ENST00000488989 UBA2Q9UBT2 640 aaPredicted RBP16.32■□□□□ 0.2
CLDN11-208ENST00000488989 CD68P34810 354 aaPredicted RBP16.31■□□□□ 0.2
CLDN11-208ENST00000488989 TERF1P54274 439 aa16.31■□□□□ 0.2
CLDN11-208ENST00000488989 TRIP13Q15645 432 aaPredicted RBP16.31■□□□□ 0.2
CLDN11-208ENST00000488989 TMEM215Q68D42 235 aa16.31■□□□□ 0.2
CLDN11-208ENST00000488989 ALG1LQ6GMV1 187 aa16.31■□□□□ 0.2
CLDN11-208ENST00000488989 RETSATQ6NUM9 610 aa16.31■□□□□ 0.2
CLDN11-208ENST00000488989 PID1Q7Z2X4 250 aa16.31■□□□□ 0.2
CLDN11-208ENST00000488989 METTL3Q86U44 580 aaKnown RBP16.31■□□□□ 0.2
CLDN11-208ENST00000488989 ADHFE1Q8IWW8 467 aa16.31■□□□□ 0.2
CLDN11-208ENST00000488989 CSGALNACT1Q8TDX6 532 aa16.31■□□□□ 0.2
CLDN11-208ENST00000488989 LRRC45Q96CN5 670 aa16.31■□□□□ 0.2
CLDN11-208ENST00000488989 PSKH2Q96QS6 385 aa16.31■□□□□ 0.2
CLDN11-208ENST00000488989 RBM22Q9NW64 420 aaKnown RBP eCLIP16.31■□□□□ 0.2
CLDN11-208ENST00000488989 WHRNQ9P202 907 aa16.31■□□□□ 0.2
CLDN11-208ENST00000488989 KLHL8Q9P2G9 620 aaPredicted RBP16.31■□□□□ 0.2
CLDN11-208ENST00000488989 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.31■□□□□ 0.2
CLDN11-208ENST00000488989 ASIC3Q9UHC3 531 aa16.31■□□□□ 0.2
CLDN11-208ENST00000488989 HS3ST2Q9Y278 367 aa16.31■□□□□ 0.2
CLDN11-208ENST00000488989 V9GYY5 206 aaPredicted RBP16.31■□□□□ 0.2
CLDN11-208ENST00000488989 F5P12259 2224 aa16.31■□□□□ 0.2
CLDN11-208ENST00000488989 DNALI1O14645 258 aaPredicted RBP16.3■□□□□ 0.2
CLDN11-208ENST00000488989 ZBTB24O43167 697 aaPredicted RBP16.3■□□□□ 0.2
CLDN11-208ENST00000488989 ASLP04424 464 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 HLA-DQB2P05538 268 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms