RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.9□□□□□ -1.95
CCDC93-209ENST00000488908 TCRBV7S3A2A0A539 114 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 C17orf102A2RUQ5 167 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 FAM72CH0Y354 149 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 IGSF3O75054 1194 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 NDST3O95803 873 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 CRYAAP02489 173 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 AFPP02771 609 aaKnown RBP2.9□□□□□ -1.95
CCDC93-209ENST00000488908 MMP3P08254 477 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 PEPDP12955 493 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 AZU1P20160 251 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 PIK3CBP42338 1070 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 PKP1Q13835 747 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 SLC1A5Q15758 541 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 C5orf22Q49AR2 442 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 ACCSLQ4AC99 568 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 XKR9Q5GH70 373 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 FAM72AQ5TYM5 149 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 FAM72DQ6L9T8 149 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 RHBDF2Q6PJF5 856 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 SLC30A9Q6PML9 568 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 TMEM200AQ86VY9 491 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 FAM72BQ86X60 149 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 ZDHHC23Q8IYP9 409 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 CCDC33Q8N5R6 958 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 MAGEB6Q8N7X4 407 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 TEX45Q8NA69 505 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 FAM110DQ8TAY7 271 aaPredicted RBP2.9□□□□□ -1.95
CCDC93-209ENST00000488908 MCRS1Q96EZ8 462 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 REXO5Q96IC2 774 aaKnown RBP2.9□□□□□ -1.95
CCDC93-209ENST00000488908 ZNF385AQ96PM9 386 aaKnown RBP2.9□□□□□ -1.95
CCDC93-209ENST00000488908 APOL5Q9BWW9 433 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 EIF2AQ9BY44 585 aaKnown RBP2.9□□□□□ -1.95
CCDC93-209ENST00000488908 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.9□□□□□ -1.95
CCDC93-209ENST00000488908 RGL1Q9NZL6 768 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 RAB21Q9UL25 225 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 TRPC5Q9UL62 973 aaPredicted RBP2.9□□□□□ -1.95
CCDC93-209ENST00000488908 CNTN6Q9UQ52 1028 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 SLC45A1Q9Y2W3 748 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 PKP3Q9Y446 797 aa2.9□□□□□ -1.95
CCDC93-209ENST00000488908 COPG1Q9Y678 874 aaKnown RBP2.9□□□□□ -1.95
CCDC93-209ENST00000488908 TBC1D3DA0A087WVF3 549 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 TBC1D3IA0A087WXS9 549 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 TBC1D3EA0A087X179 549 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 TBC1D3KA0A087X1G2 549 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 TBC1D3BA6NDS4 549 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 TBC1D3FA6NER0 549 aaPredicted RBP2.89□□□□□ -1.95
CCDC93-209ENST00000488908 POM121BA6NF01 834 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 TBC1D3LB9A6J9 549 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 P2RY10O00398 339 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 HSPB6O14558 160 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 CER1O95813 267 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 HLA-DQA2P01906 255 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 TBC1D3HP0C7X1 549 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 CDKN1AP38936 164 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 PMP22Q01453 160 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 MYBPC2Q14324 1141 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 TBC1D3GQ6DHY5 549 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 NXNQ6DKJ4 435 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 TYW3Q6IPR3 259 aaKnown RBP2.89□□□□□ -1.95
CCDC93-209ENST00000488908 TBC1D3CQ6IPX1 549 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 FOXL2NBQ6ZUU3 175 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 TRABD2AQ86V40 505 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 TBC1D3Q8IZP1 549 aaPredicted RBP2.89□□□□□ -1.95
CCDC93-209ENST00000488908 USP13Q92995 863 aaPredicted RBP2.89□□□□□ -1.95
CCDC93-209ENST00000488908 TMEM120AQ9BXJ8 343 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 CDH22Q9UJ99 828 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 DTNAQ9Y4J8 743 aa2.89□□□□□ -1.95
CCDC93-209ENST00000488908 IGHV4OR15-8A0A075B7B6 117 aa2.88□□□□□ -1.95
CCDC93-209ENST00000488908 A0A1W2PPC4 97 aa2.88□□□□□ -1.95
CCDC93-209ENST00000488908 DYTNA2CJ06 578 aa2.88□□□□□ -1.95
CCDC93-209ENST00000488908 KDM4EB2RXH2 506 aaPredicted RBP2.88□□□□□ -1.95
CCDC93-209ENST00000488908 BAG4O95429 457 aaKnown RBP2.88□□□□□ -1.95
CCDC93-209ENST00000488908 CLDN7O95471 211 aa2.88□□□□□ -1.95
CCDC93-209ENST00000488908 PRKCHP24723 683 aa2.88□□□□□ -1.95
CCDC93-209ENST00000488908 RFC1P35251 1148 aaPredicted RBP2.88□□□□□ -1.95
CCDC93-209ENST00000488908 OAZ1P54368 228 aa2.88□□□□□ -1.95
CCDC93-209ENST00000488908 RBM6P78332 1123 aaKnown RBP2.88□□□□□ -1.95
CCDC93-209ENST00000488908 ZNF543Q08ER8 600 aa2.88□□□□□ -1.95
CCDC93-209ENST00000488908 CTTNQ14247 550 aaKnown RBP2.88□□□□□ -1.95
CCDC93-209ENST00000488908 PLA2G4FQ68DD2 849 aa2.88□□□□□ -1.95
CCDC93-209ENST00000488908 DGKHQ86XP1 1220 aa2.88□□□□□ -1.95
CCDC93-209ENST00000488908 TCEAL8Q8IYN2 117 aa2.88□□□□□ -1.95
CCDC93-209ENST00000488908 RNF152Q8N8N0 203 aa2.88□□□□□ -1.95
CCDC93-209ENST00000488908 ENDOVQ8N8Q3 282 aaKnown RBP2.88□□□□□ -1.95
CCDC93-209ENST00000488908 GLIS1Q8NBF1 620 aa2.88□□□□□ -1.95
CCDC93-209ENST00000488908 STAG1Q8WVM7 1258 aa2.88□□□□□ -1.95
CCDC93-209ENST00000488908 CCDC134Q9H6E4 229 aa2.88□□□□□ -1.95
CCDC93-209ENST00000488908 SEL1LQ9UBV2 794 aa2.88□□□□□ -1.95
CCDC93-209ENST00000488908 NFU1Q9UMS0 254 aa2.88□□□□□ -1.95
CCDC93-209ENST00000488908 MAN2B2Q9Y2E5 1009 aa2.88□□□□□ -1.95
CCDC93-209ENST00000488908 A0A1B0GVM2 712 aa2.87□□□□□ -1.95
CCDC93-209ENST00000488908 NPIPB11E5RHQ5 1161 aa2.87□□□□□ -1.95
CCDC93-209ENST00000488908 RNMTO43148 476 aaKnown RBP2.87□□□□□ -1.95
CCDC93-209ENST00000488908 FGF17O60258 216 aa2.87□□□□□ -1.95
CCDC93-209ENST00000488908 SLC22A3O75751 556 aa2.87□□□□□ -1.95
CCDC93-209ENST00000488908 NTSR2O95665 410 aa2.87□□□□□ -1.95
CCDC93-209ENST00000488908 GLP2RO95838 553 aa2.87□□□□□ -1.95
CCDC93-209ENST00000488908 TSHRP16473 764 aa2.87□□□□□ -1.95
CCDC93-209ENST00000488908 HOXB9P17482 250 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms