RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, human

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD1L-208	ENST00000488864	SAE1	Q9UBE0	346 aa	Predicted RBP	13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	DOCK6	Q96HP0	2047 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	MYO16	Q9Y6X6	1858 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	FAM237B	A0A1B0GVD1	139 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	DPYSL4	O14531	572 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	MSI1	O43347	362 aa	Known RBP	13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	GSTA2	P09210	222 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	BGN	P21810	368 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	PGM1	P36871	562 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	VCP	P55072	806 aa	Known RBP	13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	SLC25A11	Q02978	314 aa	Known RBP	13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	HIF1A	Q16665	826 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	SPOCD1	Q6ZMY3	1216 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	ARC	Q7LC44	396 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	PYROXD1	Q8WU10	500 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	HSPH1	Q92598	858 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	NPY6R	Q99463	290 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	PIGV	Q9NUD9	493 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	GPATCH2L	Q9NWQ4	482 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	DDIT4	Q9NX09	232 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	STAP1	Q9ULZ2	295 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	SHOC2	Q9UQ13	582 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	DRG1	Q9Y295	367 aa	Known RBP	13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	MTO1	Q9Y2Z2	717 aa	Known RBP	13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	PLXNA3	P51805	1871 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	FCHO1	O14526	889 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	TM9SF1	O15321	606 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	CCL16	O15467	120 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	ZCCHC18	P0CG32	403 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	PTPN9	P43378	593 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	SERPINB4	P48594	390 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	EPHB3	P54753	998 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	GDF10	P55107	478 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	KRT72	Q14CN4	511 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	VEPH1	Q14D04	833 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	PRKD1	Q15139	912 aa	Predicted RBP	13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	TAC4	Q86UU9	113 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	ALYREF	Q86V81	257 aa	Known RBP	13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	SCML4	Q8N228	414 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	PPFIBP2	Q8ND30	876 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	DQX1	Q8TE96	717 aa	Known RBP	13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	ZNF184	Q99676	751 aa	Predicted RBP	13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	MAN1C1	Q9NR34	630 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	ABCC13	Q9NSE7	274 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	HSFX1	Q9UBD0	423 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	ZNF212	Q9UDV6	495 aa		13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.59	□□□□□ -0.23
CHD1L-208	ENST00000488864	GREB1	Q4ZG55	1949 aa		13.58	□□□□□ -0.23
CHD1L-208	ENST00000488864	TCRBV7S3A2	A0A539	114 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	FAM92A	A1XBS5	289 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	PRPSAP2	O60256	369 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	CLASP2	O75122	1294 aa	Known RBP	13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	TRUB2	O95900	331 aa	Known RBP	13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	LRG1	P02750	347 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	CSH1	P0DML2	217 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	CSH2	P0DML3	217 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	MYL2	P10916	166 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	DEUP1	Q05D60	604 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	SLC5A9	Q2M3M2	681 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	FBXO36	Q8NEA4	188 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	CPT1B	Q92523	772 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	CASP10	Q92851	521 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	TTC17	Q96AE7	1141 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	SERAC1	Q96JX3	654 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	GORASP1	Q9BQQ3	440 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	NMUR2	Q9GZQ4	415 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	PRO3102	Q9H379	93 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	CCSER2	Q9H7U1	834 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	PPCS	Q9HAB8	311 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	HCFC2	Q9Y5Z7	792 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	hCG_1818297	A0A087WSY0	165 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	DES	P17661	470 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	NRIP1	P48552	1158 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	HADH	Q16836	314 aa	Known RBP	13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	TREML1	Q86YW5	311 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	CCDC185	Q8N715	623 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	RNF139	Q8WU17	664 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	CENPI	Q92674	756 aa	Predicted RBP	13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	NT5C3B	Q969T7	300 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	RBM41	Q96IZ5	413 aa	Known RBP	13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	CLPTM1L	Q96KA5	538 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	FAM161B	Q96MY7	647 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	FAM111A	Q96PZ2	611 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	ACSS3	Q9H6R3	686 aa		13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	ZNF334	Q9HCZ1	680 aa	Predicted RBP	13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864	TLR8	Q9NR97	1041 aa	Known RBP	13.58	□□□□□ -0.24
CHD1L-208	ENST00000488864		B2RBV5	119 aa		13.57	□□□□□ -0.24
CHD1L-208	ENST00000488864	LYN	P07948	512 aa		13.57	□□□□□ -0.24
CHD1L-208	ENST00000488864	DHRS4L1	P0CG22	281 aa		13.57	□□□□□ -0.24
CHD1L-208	ENST00000488864	ETV4	P43268	484 aa		13.57	□□□□□ -0.24
CHD1L-208	ENST00000488864	DYNLT1	P63172	113 aa		13.57	□□□□□ -0.24
CHD1L-208	ENST00000488864	EFEMP1	Q12805	493 aa		13.57	□□□□□ -0.24
CHD1L-208	ENST00000488864	ACAP1	Q15027	740 aa		13.57	□□□□□ -0.24
CHD1L-208	ENST00000488864	ZRSR2	Q15696	482 aa	Known RBP	13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms