RNA–Protein interactions for RNA: ENST00000487947.6

PDCD10-214, Transcript of programmed cell death 10, humanhuman

TSL 5 BASIC

Gene PDCD10, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-214ENST00000487947 KIF5AQ12840 1032 aa4.27□□□□□ -1.73
PDCD10-214ENST00000487947 ALKBH1Q13686 389 aaKnown RBP4.27□□□□□ -1.73
PDCD10-214ENST00000487947 KRT81Q14533 505 aa4.27□□□□□ -1.73
PDCD10-214ENST00000487947 RPS6KA2Q15349 733 aa4.27□□□□□ -1.73
PDCD10-214ENST00000487947 PFKFB4Q16877 469 aa4.27□□□□□ -1.73
PDCD10-214ENST00000487947 ZACNQ401N2 412 aa4.27□□□□□ -1.73
PDCD10-214ENST00000487947 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.27□□□□□ -1.73
PDCD10-214ENST00000487947 C16orf82Q7Z2V1 217 aa4.27□□□□□ -1.73
PDCD10-214ENST00000487947 ARMC9Q7Z3E5 817 aa4.27□□□□□ -1.73
PDCD10-214ENST00000487947 SLC44A2Q8IWA5 706 aaPredicted RBP4.27□□□□□ -1.73
PDCD10-214ENST00000487947 ZNF527Q8NB42 609 aa4.27□□□□□ -1.73
PDCD10-214ENST00000487947 SLC2A12Q8TD20 617 aa4.27□□□□□ -1.73
PDCD10-214ENST00000487947 WFIKKN2Q8TEU8 576 aa4.27□□□□□ -1.73
PDCD10-214ENST00000487947 C2CD4CQ8TF44 421 aa4.27□□□□□ -1.73
PDCD10-214ENST00000487947 EID2BQ96D98 161 aa4.27□□□□□ -1.73
PDCD10-214ENST00000487947 ELAC1Q9H777 363 aaKnown RBP4.27□□□□□ -1.73
PDCD10-214ENST00000487947 NLRC4Q9NPP4 1024 aa4.27□□□□□ -1.73
PDCD10-214ENST00000487947 SCN5AQ14524 2016 aa4.26□□□□□ -1.73
PDCD10-214ENST00000487947 A0A087WYN8 130 aa4.26□□□□□ -1.73
PDCD10-214ENST00000487947 A0A1B0GUV1 79 aa4.26□□□□□ -1.73
PDCD10-214ENST00000487947 BTBD18B2RXH4 712 aa4.26□□□□□ -1.73
PDCD10-214ENST00000487947 HSPB6O14558 160 aa4.26□□□□□ -1.73
PDCD10-214ENST00000487947 PRC1O43663 620 aa4.26□□□□□ -1.73
PDCD10-214ENST00000487947 ACTL6BO94805 426 aa4.26□□□□□ -1.73
PDCD10-214ENST00000487947 ITGA2BP08514 1039 aa4.26□□□□□ -1.73
PDCD10-214ENST00000487947 PRKCHP24723 683 aa4.26□□□□□ -1.73
PDCD10-214ENST00000487947 PNLIPRP1P54315 467 aa4.26□□□□□ -1.73
PDCD10-214ENST00000487947 GALNT1Q10472 559 aaPredicted RBP4.26□□□□□ -1.73
PDCD10-214ENST00000487947 TRAF3Q13114 568 aa4.26□□□□□ -1.73
PDCD10-214ENST00000487947 SYTL3Q4VX76 610 aa4.26□□□□□ -1.73
PDCD10-214ENST00000487947 LRRC24Q50LG9 513 aa4.26□□□□□ -1.73
PDCD10-214ENST00000487947 C9orf50Q5SZB4 431 aa4.26□□□□□ -1.73
PDCD10-214ENST00000487947 TTC22Q5TAA0 569 aa4.26□□□□□ -1.73
PDCD10-214ENST00000487947 C9orf57Q5W0N0 161 aa4.26□□□□□ -1.73
PDCD10-214ENST00000487947 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.26□□□□□ -1.73
PDCD10-214ENST00000487947 RAB11FIP2Q7L804 512 aa4.26□□□□□ -1.73
PDCD10-214ENST00000487947 SCN4BQ8IWT1 228 aa4.26□□□□□ -1.73
PDCD10-214ENST00000487947 ZNF333Q96JL9 665 aa4.26□□□□□ -1.73
PDCD10-214ENST00000487947 ELAC2Q9BQ52 826 aaKnown RBP4.26□□□□□ -1.73
PDCD10-214ENST00000487947 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.26□□□□□ -1.73
PDCD10-214ENST00000487947 ABHD16BQ9H3Z7 469 aa4.26□□□□□ -1.73
PDCD10-214ENST00000487947 HERC5Q9UII4 1024 aaKnown RBP4.26□□□□□ -1.73
PDCD10-214ENST00000487947 C19orf53Q9UNZ5 99 aaPredicted RBP4.26□□□□□ -1.73
PDCD10-214ENST00000487947 A0A087WV62 115 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 CAMTA2O94983 1202 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 PDIA3P30101 505 aaKnown RBP4.25□□□□□ -1.73
PDCD10-214ENST00000487947 CDH12P55289 794 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 ERVFC1-1P60608 527 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 AP2B1P63010 937 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 MST1RQ04912 1400 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 COASYQ13057 564 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 DCTN1Q14203 1278 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 PLCB4Q15147 1175 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 GXYLT1Q4G148 440 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 HSP90AB2PQ58FF8 381 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 C8orf82Q6P1X6 216 aaPredicted RBP4.25□□□□□ -1.73
PDCD10-214ENST00000487947 CREB3L2Q70SY1 520 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 TRIM74Q86UV6 250 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 TRIM73Q86UV7 250 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 FJX1Q86VR8 437 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 ZBTB8BQ8NAP8 495 aaPredicted RBP4.25□□□□□ -1.73
PDCD10-214ENST00000487947 NEXN-AS1Q8NBZ9 246 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 OR14A16Q8NHC5 309 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 SLC35F5Q8WV83 523 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 FAR1Q8WVX9 515 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 TMED6Q8WW62 240 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 CPT1BQ92523 772 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 C3orf49Q96BT1 292 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 PIGSQ96S52 555 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 CLPBQ9H078 707 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 PABPC3Q9H361 631 aaKnown RBP4.25□□□□□ -1.73
PDCD10-214ENST00000487947 ACAD9Q9H845 621 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 ZNF556Q9HAH1 456 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 PRDM8Q9NQV8 689 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 KLQ9UEF7 1012 aa4.25□□□□□ -1.73
PDCD10-214ENST00000487947 SMTNL1A8MU46 457 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 ASAP2O43150 1006 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 ZNF432O94892 652 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 SOX30O94993 753 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 CLDN7O95471 211 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 IGKV3-20P01619 116 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 MYZAPP0CAP1 466 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 NAGAP17050 411 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 SERPINB3P29508 390 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 SERPINA4P29622 427 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 AVPR2P30518 371 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 AMTP48728 403 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 NUDT6P53370 316 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 TBX4P57082 545 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 SEC61A1P61619 476 aaKnown RBP4.24□□□□□ -1.73
PDCD10-214ENST00000487947 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 ATG9BQ674R7 924 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 LIN54Q6MZP7 749 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 PGBD2Q6P3X8 592 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 SPSB3Q6PJ21 355 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 KLHL17Q6TDP4 642 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 SYNE3Q6ZMZ3 975 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 RRAGAQ7L523 313 aa4.24□□□□□ -1.73
PDCD10-214ENST00000487947 CCDC117Q8IWD4 279 aaPredicted RBP4.24□□□□□ -1.73
PDCD10-214ENST00000487947 ATG16L2Q8NAA4 619 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms