RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 MAGEH1Q9H213 219 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 SP110Q9HB58 689 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 RBM22Q9NW64 420 aaKnown RBP eCLIP9.62□□□□□ -0.879e-21■■■■□ 19.5
SF3B1-211ENST00000487698 HCFC1R1Q9NWW0 138 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 TBC1D30Q9Y2I9 924 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 PCDHA11Q9Y5I1 949 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 NUP210Q8TEM1 1887 aaPredicted RBP9.62□□□□□ -0.87
SF3B1-211ENST00000487698 SDR42E2A6NKP2 422 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 TRDMT1O14717 391 aaKnown RBP9.62□□□□□ -0.87
SF3B1-211ENST00000487698 PSMD3O43242 534 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 LPXNO60711 386 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 RFPL2O75678 378 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 ANXA9O76027 345 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 EPCAMP16422 314 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 PRKCHP24723 683 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 MGAT1P26572 445 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 ATP5DP30049 168 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 STX2P32856 288 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 ATP1A2P50993 1020 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 RENBPP51606 427 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 GNA12Q03113 381 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 SLC10A7Q0GE19 358 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 PRPSAP1Q14558 356 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 NAPEPLDQ6IQ20 393 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 PDE12Q6L8Q7 609 aaKnown RBP9.62□□□□□ -0.87
SF3B1-211ENST00000487698 SETD3Q86TU7 594 aaPredicted RBP9.62□□□□□ -0.87
SF3B1-211ENST00000487698 EXOC3L1Q86VI1 746 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 ARFGAP2Q8N6H7 521 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 MAB21L3Q8N8X9 362 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 OR52K1Q8NGK4 314 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 SPATA22Q8NHS9 363 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 GSDMBQ8TAX9 411 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 SHKBP1Q8TBC3 707 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 GCNAQ96QF7 691 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 CYTH2Q99418 400 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 PAFAH2Q99487 392 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 TRIM56Q9BRZ2 755 aaKnown RBP9.62□□□□□ -0.87
SF3B1-211ENST00000487698 ATXN3LQ9H3M9 355 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 SYBUQ9NX95 663 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 PSMC3IPQ9P2W1 217 aaPredicted RBP9.62□□□□□ -0.87
SF3B1-211ENST00000487698 YBX2Q9Y2T7 364 aaKnown RBP9.62□□□□□ -0.87
SF3B1-211ENST00000487698 AAR2Q9Y312 384 aaKnown RBP9.62□□□□□ -0.87
SF3B1-211ENST00000487698 MAD1L1Q9Y6D9 718 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 C2orf16Q68DN1 1984 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 TRAV19A0A0A6YYK7 116 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 A0A0D9SEW6 157 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 ILVBLA1L0T0 632 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 POC1B-GALNT4F8VUJ3 575 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 USP12O75317 370 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 MOSPD3O75425 235 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 FGF19O95750 216 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 CKMP06732 381 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 POU2F2P09086 479 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 HNRNPA1P09651 372 aaKnown RBP eCLIP9.61□□□□□ -0.871e-13■■■■□ 20.2
SF3B1-211ENST00000487698 MYL4P12829 197 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 GJA1P17302 382 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 PGAM1P18669 254 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 ADRA1AP35348 466 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 SESN2P58004 480 aaPredicted RBP9.61□□□□□ -0.87
SF3B1-211ENST00000487698 CRADDP78560 199 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 KBTBD12Q3ZCT8 623 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 CXorf57Q6NSI4 855 aaKnown RBP9.61□□□□□ -0.87
SF3B1-211ENST00000487698 ADGRD1Q6QNK2 874 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 HTR3DQ70Z44 454 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 CYS1Q717R9 158 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 PRPF39Q86UA1 669 aaKnown RBP9.61□□□□□ -0.87
SF3B1-211ENST00000487698 CCNJLQ8IV13 435 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 MICAL1Q8TDZ2 1067 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 DCAKDQ8WVC6 231 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 PABPC5Q96DU9 382 aaKnown RBP9.61□□□□□ -0.87
SF3B1-211ENST00000487698 IMP4Q96G21 291 aaKnown RBP9.61□□□□□ -0.87
SF3B1-211ENST00000487698 ZNF599Q96NL3 588 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 NAT9Q9BTE0 207 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 SLC46A2Q9BY10 475 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 SLC25A51Q9H1U9 297 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 PIH1D1Q9NWS0 290 aaKnown RBP9.61□□□□□ -0.87
SF3B1-211ENST00000487698 TBK1Q9UHD2 729 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.61□□□□□ -0.87
SF3B1-211ENST00000487698 ALDH1A2O94788 518 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 MT-CYBP00156 380 aaPredicted RBP9.61□□□□□ -0.87
SF3B1-211ENST00000487698 GEMP55040 296 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 TMED2Q15363 201 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 SKIDA1Q1XH10 827 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 TMCO4Q5TGY1 634 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 MARC1Q5VT66 337 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 LINC00523Q86TU6 105 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 TRABD2AQ86V40 505 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 PGBD5Q8N414 524 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 HJURPQ8NCD3 748 aaPredicted RBP9.61□□□□□ -0.87
SF3B1-211ENST00000487698 OR7D4Q8NG98 312 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 MZB1Q8WU39 189 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 SLC44A1Q8WWI5 657 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 TADA1Q96BN2 335 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 ACE2Q9BYF1 805 aaPredicted RBP9.61□□□□□ -0.87
SF3B1-211ENST00000487698 CNOT10Q9H9A5 744 aaKnown RBP9.61□□□□□ -0.87
SF3B1-211ENST00000487698 MOCS1Q9NZB8 636 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 UBP1Q9NZI7 540 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 DNMT3BQ9UBC3 853 aaKnown RBP9.61□□□□□ -0.87
SF3B1-211ENST00000487698 ARHGAP26Q9UNA1 814 aa9.61□□□□□ -0.87
SF3B1-211ENST00000487698 ACTL7BQ9Y614 415 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms