RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 USP30Q70CQ3 517 aa14.95□□□□□ -0.02
LIMS3-205ENST00000487150 DAAM2Q86T65 1068 aa14.95□□□□□ -0.02
LIMS3-205ENST00000487150 PLPP6Q8IY26 295 aa14.95□□□□□ -0.02
LIMS3-205ENST00000487150 SYCE1Q8N0S2 351 aa14.95□□□□□ -0.02
LIMS3-205ENST00000487150 FRS2Q8WU20 508 aa14.95□□□□□ -0.02
LIMS3-205ENST00000487150 HMCESQ96FZ2 354 aa14.95□□□□□ -0.02
LIMS3-205ENST00000487150 MKRN2Q9H000 416 aaKnown RBP14.95□□□□□ -0.02
LIMS3-205ENST00000487150 PCED1AQ9H1Q7 454 aa14.95□□□□□ -0.02
LIMS3-205ENST00000487150 LRRC19Q9H756 370 aa14.95□□□□□ -0.02
LIMS3-205ENST00000487150 RAPGEFL1Q9UHV5 662 aa14.95□□□□□ -0.02
LIMS3-205ENST00000487150 SLCO3A1Q9UIG8 710 aa14.95□□□□□ -0.02
LIMS3-205ENST00000487150 TPX2Q9ULW0 747 aaKnown RBP14.95□□□□□ -0.02
LIMS3-205ENST00000487150 NCKAP1Q9Y2A7 1128 aa14.95□□□□□ -0.02
LIMS3-205ENST00000487150 CACNA1IQ9P0X4 2223 aa14.94□□□□□ -0.02
LIMS3-205ENST00000487150 LRRD1A4D1F6 860 aa14.94□□□□□ -0.02
LIMS3-205ENST00000487150 DCLK1O15075 740 aa14.94□□□□□ -0.02
LIMS3-205ENST00000487150 PJA2O43164 708 aa14.94□□□□□ -0.02
LIMS3-205ENST00000487150 MAP3K13O43283 966 aa14.94□□□□□ -0.02
LIMS3-205ENST00000487150 BUB1O43683 1085 aa14.94□□□□□ -0.02
LIMS3-205ENST00000487150 BUB1BO60566 1050 aaPredicted RBP14.94□□□□□ -0.02
LIMS3-205ENST00000487150 PRNPP04156 253 aa14.94□□□□□ -0.02
LIMS3-205ENST00000487150 TCF4P15884 667 aa14.94□□□□□ -0.02
LIMS3-205ENST00000487150 ZFXP17010 805 aaPredicted RBP14.94□□□□□ -0.02
LIMS3-205ENST00000487150 C5AR1P21730 350 aa14.94□□□□□ -0.02
LIMS3-205ENST00000487150 CD6P30203 668 aa14.94□□□□□ -0.02
LIMS3-205ENST00000487150 RFTN1Q14699 578 aaPredicted RBP14.94□□□□□ -0.02
LIMS3-205ENST00000487150 CST6Q15828 149 aa14.94□□□□□ -0.02
LIMS3-205ENST00000487150 Q6ZVU0 165 aa14.94□□□□□ -0.02
LIMS3-205ENST00000487150 LPCAT2Q7L5N7 544 aa14.94□□□□□ -0.02
LIMS3-205ENST00000487150 ZNF366Q8N895 744 aa14.94□□□□□ -0.02
LIMS3-205ENST00000487150 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.94□□□□□ -0.02
LIMS3-205ENST00000487150 NSMCE1Q8WV22 266 aa14.94□□□□□ -0.02
LIMS3-205ENST00000487150 TSC1Q92574 1164 aa14.94□□□□□ -0.02
LIMS3-205ENST00000487150 PPP1R16AQ96I34 528 aa14.94□□□□□ -0.02
LIMS3-205ENST00000487150 ZC3H10Q96K80 434 aaKnown RBP14.94□□□□□ -0.02
LIMS3-205ENST00000487150 ZNF830Q96NB3 372 aaPredicted RBP14.94□□□□□ -0.02
LIMS3-205ENST00000487150 SP110Q9HB58 689 aa14.94□□□□□ -0.02
LIMS3-205ENST00000487150 NDFIP2Q9NV92 336 aa14.94□□□□□ -0.02
LIMS3-205ENST00000487150 PCDHGA5Q9Y5G8 931 aa14.94□□□□□ -0.02
LIMS3-205ENST00000487150 WDFY4Q6ZS81 3184 aa14.94□□□□□ -0.02
LIMS3-205ENST00000487150 MCF2LO15068 1137 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 HRO43593 1189 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 KRT86O43790 486 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 FOXD2O60548 495 aaPredicted RBP14.93□□□□□ -0.02
LIMS3-205ENST00000487150 NDUFS2O75306 463 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 KRT1P04264 644 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 CCDC175P0C221 793 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 MX2P20592 715 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 COMTP21964 271 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 ACVRL1P37023 503 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 TAS2R40P59535 323 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 RPS14P62263 151 aaKnown RBP14.93□□□□□ -0.02
LIMS3-205ENST00000487150 SNRPD1P62314 119 aaKnown RBP14.93□□□□□ -0.02
LIMS3-205ENST00000487150 ARF5P84085 180 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 RAD51Q06609 339 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 DPYSL3Q14195 570 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 MAP7D1Q3KQU3 841 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 AFMIDQ63HM1 303 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 LINGO4Q6UY18 593 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 LRRC8AQ8IWT6 810 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 BBS5Q8N3I7 341 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 ATPAF2Q8N5M1 289 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 ACRBPQ8NEB7 543 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 TPCN2Q8NHX9 752 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 PTPRN2Q92932 1015 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 FOXJ1Q92949 421 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 FAF2Q96CS3 445 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 RBM41Q96IZ5 413 aaKnown RBP14.93□□□□□ -0.02
LIMS3-205ENST00000487150 LRIG1Q96JA1 1093 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 GDAP1L1Q96MZ0 367 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 ZNF599Q96NL3 588 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 MAK16Q9BXY0 300 aaKnown RBP14.93□□□□□ -0.02
LIMS3-205ENST00000487150 MAGEB5Q9BZ81 275 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 PABPC3Q9H361 631 aaKnown RBP14.93□□□□□ -0.02
LIMS3-205ENST00000487150 NOL6Q9H6R4 1146 aaKnown RBP14.93□□□□□ -0.02
LIMS3-205ENST00000487150 SGK2Q9HBY8 427 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 ITM2CQ9NQX7 267 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 DYRK4Q9NR20 520 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 NCDNQ9UBB6 729 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 UBA2Q9UBT2 640 aaPredicted RBP14.93□□□□□ -0.02
LIMS3-205ENST00000487150 FZD4Q9ULV1 537 aa14.93□□□□□ -0.02
LIMS3-205ENST00000487150 MUC22E2RYF6 1773 aaPredicted RBP14.93□□□□□ -0.02
LIMS3-205ENST00000487150 IGHV1OR15-9A0A0B4J2B8 117 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 DFFAO00273 331 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 SLC7A4O43246 635 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 PRAMEF11O60813 436 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 LRP3O75074 770 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 IGSF6O95976 241 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 GSRP00390 522 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 IL1BP01584 269 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 RETP07949 1114 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 HOXD12P35452 270 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 CETN2P41208 172 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 MAPK8P45983 427 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 TPMTP51580 245 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 ARSEP51690 589 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 IL10RBQ08334 325 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 GRM3Q14832 879 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 PMS2CLQ68D20 193 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 TXNRD3NBQ6F5E7 133 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms