RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 CFAP36Q96G28 342 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 OXNAD1Q96HP4 312 aaPredicted RBP11.85□□□□□ -0.51
PRKCB-207ENST00000486868 ZFRQ96KR1 1074 aaKnown RBP11.85□□□□□ -0.51
PRKCB-207ENST00000486868 SELENOSQ9BQE4 189 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 HTATIP2Q9BUP3 242 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 KIFC1Q9BW19 673 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 CEP41Q9BYV8 373 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 TRABDQ9H4I3 376 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 SP110Q9HB58 689 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 MKS1Q9NXB0 559 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 NKIRAS1Q9NYS0 192 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 CXXC1Q9P0U4 656 aaPredicted RBP11.85□□□□□ -0.51
PRKCB-207ENST00000486868 SAMD15Q9P1V8 674 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 SOX13Q9UN79 622 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 MYO16Q9Y6X6 1858 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.84□□□□□ -0.51
PRKCB-207ENST00000486868 TM9SF1O15321 606 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 TYROBPO43914 113 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 ZWINTO95229 277 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 FAM107AO95990 144 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 GLUD1P00367 558 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 EPOP01588 193 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 KLKB1P03952 638 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 HLA-DQB2P05538 268 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 MBL2P11226 248 aaPredicted RBP11.84□□□□□ -0.51
PRKCB-207ENST00000486868 MGAT1P26572 445 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 CORO1AP31146 461 aaKnown RBP11.84□□□□□ -0.51
PRKCB-207ENST00000486868 SLC6A4P31645 630 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 GBP2P32456 591 aaPredicted RBP11.84□□□□□ -0.51
PRKCB-207ENST00000486868 SESN2P58004 480 aaPredicted RBP11.84□□□□□ -0.51
PRKCB-207ENST00000486868 MGAT5Q09328 741 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 NIPAL4Q0D2K0 466 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 CRYMQ14894 314 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 PCID2Q5JVF3 399 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 MPP7Q5T2T1 576 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 RANBP10Q6VN20 620 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 CAPN12Q6ZSI9 719 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 HTR3DQ70Z44 454 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 TFAP2DQ7Z6R9 452 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 TMC8Q8IU68 726 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 SRRM1Q8IYB3 904 aaKnown RBP11.84□□□□□ -0.51
PRKCB-207ENST00000486868 MPP5Q8N3R9 675 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 CPXM2Q8N436 756 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 OR52K1Q8NGK4 314 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 SPPL3Q8TCT6 385 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 AUTS2Q8WXX7 1259 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 RANBP9Q96S59 729 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 TBL1YQ9BQ87 522 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 RNF38Q9H0F5 515 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 PDFQ9HBH1 243 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 ZNF334Q9HCZ1 680 aaPredicted RBP11.84□□□□□ -0.51
PRKCB-207ENST00000486868 ATP13A1Q9HD20 1204 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 SYBUQ9NX95 663 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 NSMCE4AQ9NXX6 385 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 TBK1Q9UHD2 729 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 DPP7Q9UHL4 492 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 GGA2Q9UJY4 613 aa11.84□□□□□ -0.51
PRKCB-207ENST00000486868 LSM7Q9UK45 103 aaKnown RBP11.84□□□□□ -0.51
PRKCB-207ENST00000486868 AGO1Q9UL18 857 aaKnown RBP11.84□□□□□ -0.51
PRKCB-207ENST00000486868 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.83□□□□□ -0.52
PRKCB-207ENST00000486868 GOLGA6L7A0A1B0GV03 622 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 C2orf78A6NCI8 922 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 C2orf71A6NGG8 1288 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 KDELR3O43731 214 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 GREM1O60565 184 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 LPXNO60711 386 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 MT-ND3P03897 115 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 C8AP07357 584 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 HNRNPA1P09651 372 aaKnown RBP eCLIP11.83□□□□□ -0.52
PRKCB-207ENST00000486868 HDCP19113 662 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 OXCT1P55809 520 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 GNA12Q03113 381 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 ZNF177Q13360 481 aaPredicted RBP11.83□□□□□ -0.52
PRKCB-207ENST00000486868 LAMB3Q13751 1172 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 LBRQ14739 615 aaKnown RBP11.83□□□□□ -0.52
PRKCB-207ENST00000486868 SKIDA1Q1XH10 827 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 ANKRD20A4Q4UJ75 823 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 SYCP2LQ5T4T6 812 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 RNF43Q68DV7 783 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 DENND5AQ6IQ26 1287 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 KDELC1Q6UW63 502 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 RGS9BPQ6ZS82 235 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 SH2D5Q6ZV89 423 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 ZNF771Q7L3S4 317 aaPredicted RBP11.83□□□□□ -0.52
PRKCB-207ENST00000486868 OTOP3Q7RTS5 596 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 PRPF39Q86UA1 669 aaKnown RBP11.83□□□□□ -0.52
PRKCB-207ENST00000486868 SPATS2Q86XZ4 545 aaKnown RBP11.83□□□□□ -0.52
PRKCB-207ENST00000486868 DENND1CQ8IV53 801 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 KIAA1958Q8N8K9 716 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 DNAAF3Q8N9W5 541 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 MDM1Q8TC05 714 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 BCAS4Q8TDM0 211 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 ACMSDQ8TDX5 336 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 CKAP2Q8WWK9 683 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 PEX13Q92968 403 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 CHMP6Q96FZ7 201 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 ZNF317Q96PQ6 595 aaPredicted RBP11.83□□□□□ -0.52
PRKCB-207ENST00000486868 GCNAQ96QF7 691 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 TCF25Q9BQ70 676 aa11.83□□□□□ -0.52
PRKCB-207ENST00000486868 ACE2Q9BYF1 805 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms