RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 TNK2Q07912 1038 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 SMAD4Q13485 552 aaKnown RBP13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 SKIV2LQ15477 1246 aaKnown RBP13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 INO80DQ53TQ3 878 aaPredicted RBP13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 RETSATQ6NUM9 610 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 HIBCHQ6NVY1 386 aaPredicted RBP13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 EMBQ6PCB8 327 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 PPP1R21Q6ZMI0 780 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 ARHGAP36Q6ZRI8 547 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 PLCD3Q8N3E9 789 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 TEX26Q8N6G2 289 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 OR7D4Q8NG98 312 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 LRRN4Q8WUT4 740 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 NXPE3Q969Y0 559 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 EXOC4Q96A65 974 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 FAM83CQ9BQN1 747 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 RAB6BQ9NRW1 208 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 PLK2Q9NYY3 685 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 GRHL1Q9NZI5 618 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 UBA2Q9UBT2 640 aaPredicted RBP13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 CDH22Q9UJ99 828 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 SHOC2Q9UQ13 582 aa13.53□□□□□ -0.24
VTI1BP1-201ENST00000486325 E7EVH7 732 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 J3KR12 359 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 ZBTB24O43167 697 aaPredicted RBP13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 ADH5P11766 374 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 FOSL2P15408 326 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 HSPA9P38646 679 aaKnown RBP13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 MAGEA6P43360 314 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 BASP1P80723 227 aaKnown RBP13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 LBRQ14739 615 aaKnown RBP13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 TRADDQ15628 312 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 CCDC85BQ15834 202 aaPredicted RBP13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 PREPLQ4J6C6 727 aaPredicted RBP13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 FSCBQ5H9T9 825 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 RNASEH2BQ5TBB1 312 aaKnown RBP13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 VITQ6UXI7 678 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 PRUNE1Q86TP1 453 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 CPA6Q8N4T0 437 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 DEFB123Q8N688 67 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 DCAF4L2Q8NA75 395 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 BHMTQ93088 406 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 HLA-CQ95604 372 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 ALG14Q96F25 216 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 TRMT61BQ9BVS5 477 aaKnown RBP13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 ETNK1Q9HBU6 452 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 GLOD4Q9HC38 313 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 ARFGAP3Q9NP61 516 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 ZDHHC18Q9NUE0 388 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 SEPT3Q9UH03 358 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 RSPH14Q9UHP6 348 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 FBXO10Q9UK96 956 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 AAR2Q9Y312 384 aaKnown RBP13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 OR51B4Q9Y5P0 310 aa13.52□□□□□ -0.25
VTI1BP1-201ENST00000486325 H3BQ06 376 aaPredicted RBP13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 AP3B1O00203 1094 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 CBX4O00257 560 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 MBTPS2O43462 519 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 CACNG3O60359 315 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 ANXA9O76027 345 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 PEX11BO96011 259 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 CYP17A1P05093 508 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 H2AFXP16104 143 aaPredicted RBP13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 KCNA5P22460 613 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 MZF1P28698 734 aaPredicted RBP13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 CSKP41240 450 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 MMP13P45452 471 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 LMAN1P49257 510 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 LMAN2Q12907 356 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 ZBTB17Q13105 803 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 SEMA5AQ13591 1074 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 SLMAPQ14BN4 828 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 PLEKHG6Q3KR16 790 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 PUS10Q3MIT2 529 aaKnown RBP13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 HABP4Q5JVS0 413 aaKnown RBP13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 MCUQ8NE86 351 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 OR52K2Q8NGK3 314 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 FBXO25Q8TCJ0 367 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 CPT1BQ92523 772 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 AGAP3Q96P47 875 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 FCRL5Q96RD9 977 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 FMO2Q99518 471 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 GBA3Q9H227 469 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 ECT2Q9H8V3 914 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 PDFQ9HBH1 243 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 EIF2B3Q9NR50 452 aaKnown RBP13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 FAM50BQ9Y247 325 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 ATP8A1Q9Y2Q0 1164 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 FARP1Q9Y4F1 1045 aaPredicted RBP13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 DOCK8Q8NF50 2099 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 CHD5Q8TDI0 1954 aa13.51□□□□□ -0.25
VTI1BP1-201ENST00000486325 BRWD1Q9NSI6 2320 aa13.5□□□□□ -0.25
VTI1BP1-201ENST00000486325 GRXCR2A6NFK2 248 aa13.5□□□□□ -0.25
VTI1BP1-201ENST00000486325 ANHXE9PGG2 379 aa13.5□□□□□ -0.25
VTI1BP1-201ENST00000486325 TIMM44O43615 452 aa13.5□□□□□ -0.25
VTI1BP1-201ENST00000486325 ZMPSTE24O75844 475 aa13.5□□□□□ -0.25
VTI1BP1-201ENST00000486325 METTL18O95568 372 aa13.5□□□□□ -0.25
VTI1BP1-201ENST00000486325 PABPC1P11940 636 aaKnown RBP13.5□□□□□ -0.25
VTI1BP1-201ENST00000486325 TPSB2P20231 275 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms