RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 CBX4O00257 560 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 SMAD6O43541 496 aaKnown RBP18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 ZMPSTE24O75844 475 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 PLEKP08567 350 aaPredicted RBP18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 RHOQP17081 205 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 GLDCP23378 1020 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 CHRNA3P32297 505 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 ZNF143P52747 638 aaPredicted RBP18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 SIM1P81133 766 aaPredicted RBP18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 GNA12Q03113 381 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 FOXC1Q12948 553 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 NR1I3Q14994 352 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 KLHL40Q2TBA0 621 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 PPP1R15BQ5SWA1 713 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 FAM72AQ5TYM5 149 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 FAM72DQ6L9T8 149 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 RWDD4Q6NW29 188 aaKnown RBP18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 PPP1R2P3Q6NXS1 205 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 LINGO4Q6UY18 593 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 DBX2Q6ZNG2 339 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 ADAT2Q7Z6V5 191 aaKnown RBP18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 NLRP14Q86W24 1093 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 FAM72BQ86X60 149 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 DRC7Q8IY82 874 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 CCDC185Q8N715 623 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 TMIEQ8NEW7 156 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 VCPIP1Q96JH7 1222 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 CAMK1GQ96NX5 476 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 ATP13A1Q9HD20 1204 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 WASF3Q9UPY6 502 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 FNDC3AQ9Y2H6 1198 aaKnown RBP18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 PCDHGB2Q9Y5G2 931 aa18.83■□□□□ 0.6
PRPF40A-209ENST00000486100 CXorf51AA0A1B0GTR3 108 aa18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 ANKRD62A6NC57 917 aa18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 LRRC53A6NM62 1247 aa18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 PLK4O00444 970 aa18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 VILLO15195 856 aa18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 PLRG1O43660 514 aaKnown RBP18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 RTN2O75298 545 aa18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 LRIG2O94898 1065 aa18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 MAPKAPK2P49137 400 aa18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 RPL7AP62424 266 aaKnown RBP18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 FAM193AP78312 1265 aa18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 SCAPQ12770 1279 aa18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 CNTN1Q12860 1018 aa18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 TRIP6Q15654 476 aaKnown RBP18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 SLFN11Q7Z7L1 901 aa18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 NAXDQ8IW45 347 aa18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 SKA1Q96BD8 255 aa18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 TBC1D31Q96DN5 1066 aa18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 ACE2Q9BYF1 805 aaPredicted RBP18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 EDEM3Q9BZQ6 932 aa18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 TMEM248Q9NWD8 314 aa18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 TAS2R14Q9NYV8 317 aa18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 AIPL1Q9NZN9 384 aa18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 PCDHB9Q9Y5E1 797 aa18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 ADAMTS9Q9P2N4 1935 aa18.82■□□□□ 0.6
PRPF40A-209ENST00000486100 SYCE3A1L190 88 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 CCP110O43303 1012 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 LATO43561 262 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 ZNF821O75541 412 aaPredicted RBP18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 SERPINC1P01008 464 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 CTSLP07711 333 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 ETFBP38117 255 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 CTSKP43235 329 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 RECQLP46063 649 aaPredicted RBP18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 C21orf59P57076 290 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 CCDC15Q0P6D6 951 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 SUZ12Q15022 739 aaKnown RBP18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 ASIC2Q16515 512 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 POM121L1PQ3SYA9 428 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 KCNT1Q5JUK3 1230 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 AGBL4Q5VU57 503 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 SFMBT2Q5VUG0 894 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 SCYL2Q6P3W7 929 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 C22orf39Q6P5X5 142 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 DCUN1D2Q6PH85 259 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 LAYNQ6UX15 382 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 PRPF39Q86UA1 669 aaKnown RBP18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 SLC6A18Q96N87 628 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 MCEEQ96PE7 176 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 CNPY3Q9BT09 278 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 CEP44Q9C0F1 390 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 HAUS4Q9H6D7 363 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 NDFIP2Q9NV92 336 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 DNAI1Q9UI46 699 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 CACNA1EQ15878 2313 aa18.81■□□□□ 0.6
PRPF40A-209ENST00000486100 KCNK3O14649 394 aa18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 DFNA5O60443 496 aa18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 CBFA2T3O75081 653 aa18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 PRNPP04156 253 aa18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 CD38P28907 300 aa18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 L1CAMP32004 1257 aa18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 ACVRL1P37023 503 aa18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 PRKCIP41743 596 aa18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 SERPINH1P50454 418 aaKnown RBP18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 PPP2CBP62714 309 aa18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 PPP2CAP67775 309 aa18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 ARF5P84085 180 aa18.8■□□□□ 0.6
PRPF40A-209ENST00000486100 ZNF423Q2M1K9 1284 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms