RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 ZMPSTE24O75844 475 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 PROSCO94903 275 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 SRCP12931 536 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 VAV1P15498 845 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 GLDCP23378 1020 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 IL1R2P27930 398 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 CDC25BP30305 580 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 CYLC1P35663 651 aaPredicted RBP12.72□□□□□ -0.37
HMG20B-211ENST00000486028 MAGEA1P43355 309 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 CREB5Q02930 508 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 SPEM2Q0P670 501 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 SPA17Q15506 151 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 CST6Q15828 149 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 PARP15Q460N3 678 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 KCNT1Q5JUK3 1230 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 DAB2IPQ5VWQ8 1189 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 RFX8Q6ZV50 586 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 ZNF354CQ86Y25 554 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 CACUL1Q86Y37 369 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 TMTC1Q8IUR5 882 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 MMAAQ8IVH4 418 aaKnown RBP12.72□□□□□ -0.37
HMG20B-211ENST00000486028 UMODL1-AS1Q8N2C9 162 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 HSPH1Q92598 858 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 TOE1Q96GM8 510 aaKnown RBP12.72□□□□□ -0.37
HMG20B-211ENST00000486028 CEP44Q9C0F1 390 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 ARRDC1-AS1Q9H2J1 176 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 PABPC3Q9H361 631 aaKnown RBP12.72□□□□□ -0.37
HMG20B-211ENST00000486028 LUC7LQ9NQ29 371 aaKnown RBP12.72□□□□□ -0.37
HMG20B-211ENST00000486028 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.72□□□□□ -0.37
HMG20B-211ENST00000486028 WSB2Q9NYS7 404 aaPredicted RBP12.72□□□□□ -0.37
HMG20B-211ENST00000486028 IMPACTQ9P2X3 320 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 EML5Q05BV3 1969 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 BCLAF3A2AJT9 711 aaKnown RBP12.71□□□□□ -0.37
HMG20B-211ENST00000486028 ZSCAN5CA6NGD5 496 aaPredicted RBP12.71□□□□□ -0.37
HMG20B-211ENST00000486028 K7ERQ8 282 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 MCF2LO15068 1137 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 ALOX15BO15296 676 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 FOXD2O60548 495 aaPredicted RBP12.71□□□□□ -0.37
HMG20B-211ENST00000486028 ADH1BP00325 375 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 IL1BP01584 269 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 RARAP10276 462 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 TCF4P15884 667 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 GOT1P17174 413 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 C5AR1P21730 350 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 SLC8A1P32418 973 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 MAN1A1P33908 653 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 ARL4AP40617 200 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 ARHGAP25P42331 645 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 DPP6P42658 865 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 RECQLP46063 649 aaPredicted RBP12.71□□□□□ -0.37
HMG20B-211ENST00000486028 SERPINH1P50454 418 aaKnown RBP12.71□□□□□ -0.37
HMG20B-211ENST00000486028 NDST2P52849 883 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 MESDQ14696 234 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 DPYSL2Q16555 572 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 SMTNL2Q2TAL5 461 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 HS1BP3Q53T59 392 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 FAM46CQ5VWP2 391 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 LYSMD4Q5XG99 296 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 Q6ZVU0 165 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 USP30Q70CQ3 517 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 CYP2U1Q7Z449 544 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 FAM124AQ86V42 546 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 PARP9Q8IXQ6 854 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 DEFB119Q8N690 84 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 CADM4Q8NFZ8 388 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 RFFLQ8WZ73 363 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 ANP32BQ92688 251 aaKnown RBP12.71□□□□□ -0.37
HMG20B-211ENST00000486028 FOXJ1Q92949 421 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 NOL6Q9H6R4 1146 aaKnown RBP12.71□□□□□ -0.37
HMG20B-211ENST00000486028 OSGEPQ9NPF4 335 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 CD93Q9NPY3 652 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 VPS45Q9NRW7 570 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 FBXL12Q9NXK8 326 aa12.71□□□□□ -0.37
HMG20B-211ENST00000486028 CWC15Q9P013 229 aaKnown RBP12.71□□□□□ -0.37
HMG20B-211ENST00000486028 MUC22E2RYF6 1773 aaPredicted RBP12.71□□□□□ -0.38
HMG20B-211ENST00000486028 TMEM110-MUSTN1A8MSY1 372 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 GOLGA6L6A8MZA4 724 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 RASA4BC9J798 803 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 MID1O15344 667 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 RASA4O43374 803 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 SMAD6O43541 496 aaKnown RBP12.7□□□□□ -0.38
HMG20B-211ENST00000486028 BUB1O43683 1085 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 BNIP3LO60238 219 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 MTA2O94776 668 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 IPO7O95373 1038 aaKnown RBP12.7□□□□□ -0.38
HMG20B-211ENST00000486028 LCA5LO95447 670 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 KRT7P08729 469 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 ERCC2P18074 760 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 FECHP22830 423 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 MPLP40238 635 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 PTGER3P43115 390 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 PSMD8P48556 350 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 DNA2P51530 1060 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 ARF5P84085 180 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 SLC25A11Q02978 314 aaKnown RBP12.7□□□□□ -0.38
HMG20B-211ENST00000486028 ZNF33AQ06730 810 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 SERINC3Q13530 473 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 DPYSQ14117 519 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 KRT81Q14533 505 aa12.7□□□□□ -0.38
HMG20B-211ENST00000486028 TCEAL1Q15170 157 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms