RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 RLN3Q8WXF3 142 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 MTG2Q9H4K7 406 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 PCDH18Q9HCL0 1135 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.17■□□□□ 0.5
SREBF1-213ENST00000485080 HPCAL4Q9UM19 191 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 PCDHGA5Q9Y5G8 931 aa18.17■□□□□ 0.5
SREBF1-213ENST00000485080 CEP250Q9BV73 2442 aa18.16■□□□□ 0.5
SREBF1-213ENST00000485080 RASA4BC9J798 803 aa18.16■□□□□ 0.5
SREBF1-213ENST00000485080 MCF2LO15068 1137 aa18.16■□□□□ 0.5
SREBF1-213ENST00000485080 RASA4O43374 803 aa18.16■□□□□ 0.5
SREBF1-213ENST00000485080 SMAD6O43541 496 aaKnown RBP18.16■□□□□ 0.5
SREBF1-213ENST00000485080 ZNF821O75541 412 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-213ENST00000485080 IPO7O95373 1038 aaKnown RBP18.16■□□□□ 0.5
SREBF1-213ENST00000485080 ERCC2P18074 760 aa18.16■□□□□ 0.5
SREBF1-213ENST00000485080 BCKDHBP21953 392 aa18.16■□□□□ 0.5
SREBF1-213ENST00000485080 GLDCP23378 1020 aa18.16■□□□□ 0.5
SREBF1-213ENST00000485080 ARL4AP40617 200 aa18.16■□□□□ 0.5
SREBF1-213ENST00000485080 SERINC3Q13530 473 aa18.16■□□□□ 0.5
SREBF1-213ENST00000485080 INO80DQ53TQ3 878 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-213ENST00000485080 LRRC38Q5VT99 294 aa18.16■□□□□ 0.5
SREBF1-213ENST00000485080 RAD9BQ6WBX8 426 aa18.16■□□□□ 0.5
SREBF1-213ENST00000485080 USP30Q70CQ3 517 aa18.16■□□□□ 0.5
SREBF1-213ENST00000485080 SPC24Q8NBT2 197 aa18.16■□□□□ 0.5
SREBF1-213ENST00000485080 CASKIN2Q8WXE0 1202 aa18.16■□□□□ 0.5
SREBF1-213ENST00000485080 CSPG4P5Q96PW8 444 aa18.16■□□□□ 0.5
SREBF1-213ENST00000485080 WSB2Q9NYS7 404 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-213ENST00000485080 THADAQ6YHU6 1953 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 BTNL10A8MVZ5 291 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 ZNF487B1APH4 448 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 DAPK3O43293 454 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 EPN2O95208 641 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 ACADMP11310 421 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 IL4RP24394 825 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 CD6P30203 668 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 TAS2R40P59535 323 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 MESDQ14696 234 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 PDK2Q15119 407 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 TTC31Q49AM3 519 aaPredicted RBP18.15■□□□□ 0.5
SREBF1-213ENST00000485080 LPCAT2Q7L5N7 544 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 DSG4Q86SJ6 1040 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 VSIG1Q86XK7 387 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 STK40Q8N2I9 435 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 PCDH20Q8N6Y1 951 aaKnown RBP18.15■□□□□ 0.5
SREBF1-213ENST00000485080 HSPH1Q92598 858 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 FAM131CQ96AQ9 280 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 HMCESQ96FZ2 354 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 CCDC114Q96M63 670 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 PCED1AQ9H1Q7 454 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 PABPC3Q9H361 631 aaKnown RBP18.15■□□□□ 0.5
SREBF1-213ENST00000485080 GMEB2Q9UKD1 530 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 PPM1HQ9ULR3 514 aa18.15■□□□□ 0.5
SREBF1-213ENST00000485080 K7ERQ8 282 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 PJA2O43164 708 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 ADH1BP00325 375 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 DNTTP04053 509 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 VAV1P15498 845 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 C5AR1P21730 350 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 NUMBP49757 651 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 CST6Q15828 149 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 ACCSLQ4AC99 568 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 C22orf39Q6P5X5 142 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 LINGO4Q6UY18 593 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 Q6ZVU0 165 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 ALYREFQ86V81 257 aaKnown RBP18.14■□□□□ 0.49
SREBF1-213ENST00000485080 CPNE8Q86YQ8 564 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 MAP7D3Q8IWC1 876 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 ARHGAP12Q8IWW6 846 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 FRMD1Q8N878 549 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 CADM4Q8NFZ8 388 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 OR2A12Q8NGT7 310 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 OR8D1Q8WZ84 308 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 FAF2Q96CS3 445 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 ERLEC1Q96DZ1 483 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 ZNF419Q96HQ0 510 aaPredicted RBP18.14■□□□□ 0.49
SREBF1-213ENST00000485080 ZNF670Q9BS34 389 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 CYP8B1Q9UNU6 501 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 INVSQ9Y283 1065 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 REXO2Q9Y3B8 237 aaKnown RBP18.14■□□□□ 0.49
SREBF1-213ENST00000485080 NUMA1Q14980 2115 aa18.14■□□□□ 0.49
SREBF1-213ENST00000485080 LAMA1P25391 3075 aa18.13■□□□□ 0.49
SREBF1-213ENST00000485080 ARHGAP42A6NI28 874 aa18.13■□□□□ 0.49
SREBF1-213ENST00000485080 MAP3K13O43283 966 aa18.13■□□□□ 0.49
SREBF1-213ENST00000485080 DPP6P42658 865 aa18.13■□□□□ 0.49
SREBF1-213ENST00000485080 SSR1P43307 286 aaKnown RBP18.13■□□□□ 0.49
SREBF1-213ENST00000485080 CDH6P55285 790 aa18.13■□□□□ 0.49
SREBF1-213ENST00000485080 DPYSL3Q14195 570 aa18.13■□□□□ 0.49
SREBF1-213ENST00000485080 FAM46CQ5VWP2 391 aa18.13■□□□□ 0.49
SREBF1-213ENST00000485080 MMAAQ8IVH4 418 aaKnown RBP18.13■□□□□ 0.49
SREBF1-213ENST00000485080 GPR161Q8N6U8 529 aaKnown RBP18.13■□□□□ 0.49
SREBF1-213ENST00000485080 TMIEQ8NEW7 156 aa18.13■□□□□ 0.49
SREBF1-213ENST00000485080 TOE1Q96GM8 510 aaKnown RBP18.13■□□□□ 0.49
SREBF1-213ENST00000485080 PDFQ9HBH1 243 aa18.13■□□□□ 0.49
SREBF1-213ENST00000485080 SGK2Q9HBY8 427 aa18.13■□□□□ 0.49
SREBF1-213ENST00000485080 CD93Q9NPY3 652 aa18.13■□□□□ 0.49
SREBF1-213ENST00000485080 NCDNQ9UBB6 729 aa18.13■□□□□ 0.49
SREBF1-213ENST00000485080 FZD4Q9ULV1 537 aa18.13■□□□□ 0.49
SREBF1-213ENST00000485080 FARP1Q9Y4F1 1045 aaPredicted RBP18.13■□□□□ 0.49
SREBF1-213ENST00000485080 CACNA1EQ15878 2313 aa18.12■□□□□ 0.49
SREBF1-213ENST00000485080 NYNRINQ9P2P1 1898 aaKnown RBP18.12■□□□□ 0.49
SREBF1-213ENST00000485080 C10orf142B7Z368 130 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms