RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 SELENOSQ9BQE4 189 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 RTKNQ9BST9 563 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 C9orf16Q9BUW7 83 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 BOCQ9BWV1 1114 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 TBC1D10AQ9BXI6 508 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 PKIBQ9C010 78 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 ZNF518BQ9C0D4 1074 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 BHLHE41Q9C0J9 482 aaPredicted RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 TINAGL1Q9GZM7 467 aaPredicted RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 RAB33BQ9H082 229 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 PCED1AQ9H1Q7 454 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 SLC26A1Q9H2B4 701 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 NKX2-4Q9H2Z4 354 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 C12orf65Q9H3J6 166 aaKnown RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 ST6GALNAC4Q9H4F1 302 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 MVB12BQ9H7P6 319 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 KAT14Q9H8E8 782 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 CHODLQ9H9P2 273 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 POLR1BQ9H9Y6 1135 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 CLK4Q9HAZ1 481 aaKnown RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 RXFP1Q9HBX9 757 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 SYTL2Q9HCH5 934 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 PALMDQ9NP74 551 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 LTB4R2Q9NPC1 389 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 NGBQ9NPG2 151 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 TMPRSS4Q9NRS4 437 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 CNNM1Q9NRU3 951 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 FARSBQ9NSD9 589 aaKnown RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 RBM12Q9NTZ6 932 aaKnown RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 SMPD3Q9NY59 655 aaPredicted RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 RGL1Q9NZL6 768 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 COL20A1Q9P218 1284 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 DBF4Q9UBU7 674 aaPredicted RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 ARMCX3Q9UH62 379 aaPredicted RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 KLHL3Q9UH77 587 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 OSGIN1Q9UJX0 560 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 KIAA1257Q9ULG3 409 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 PPIEQ9UNP9 301 aaKnown RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 R3HDM2Q9Y2K5 976 aaKnown RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 MRPS7Q9Y2R9 242 aaKnown RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 STRAPQ9Y3F4 350 aaKnown RBP3.58□□□□□ -1.84
FXN-204ENST00000484259 PCDHB4Q9Y5E5 795 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 PCDHB2Q9Y5E7 798 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 ZNF536O15090 1300 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 NPC1L1Q9UHC9 1359 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 PTPRGP23470 1445 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 ARAP1Q96P48 1450 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 PRXQ9BXM0 1461 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 IQGAP2Q13576 1575 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 CYP3A7-CYP3A51PA0A087WV96 503 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.57□□□□□ -1.84
FXN-204ENST00000484259 A0A1B0GTQ1 180 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 FAM230AA0A1W2PPH8 454 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 GOLGA8OA6NCC3 632 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 VWA3AA6NCI4 1184 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 OOEPA6NGQ2 149 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 OR6C75A6NL08 312 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 OR5K4A6NMS3 321 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 ZNF716A6NP11 495 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 AHRRA9YTQ3 701 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 GOLGA8NF8WBI6 632 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 WRBO00258 174 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 DYNC1I1O14576 645 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 DNALI1O14645 258 aaPredicted RBP3.57□□□□□ -1.84
FXN-204ENST00000484259 WNT9AO14904 365 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 NKRFO15226 690 aaKnown RBP eCLIP3.57□□□□□ -1.84
FXN-204ENST00000484259 DNAJA2O60884 412 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 ATP6V1G1O75348 118 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 CBR3O75828 277 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 ATP5HO75947 161 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 MFN2O95140 757 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 SPDEFO95238 335 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 KCNK5O95279 499 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 PTBP3O95758 552 aaKnown RBP3.57□□□□□ -1.84
FXN-204ENST00000484259 NDST3O95803 873 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 CAVIN2O95810 425 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 AK1P00568 194 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 MT-ATP6P00846 226 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 CSTAP01040 98 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 PDGFBP01127 241 aaPredicted RBP3.57□□□□□ -1.84
FXN-204ENST00000484259 MT-ND5P03915 603 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 KRT6BP04259 564 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 PCCBP05166 539 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 LIPFP07098 398 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 ADH1AP07327 375 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 ZNF735P0CB33 412 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 PRKCAP17252 672 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 CKMT2P17540 419 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 PTPRAP18433 802 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 CD247P20963 164 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 HNRNPA2B1P22626 353 aaKnown RBP3.57□□□□□ -1.84
FXN-204ENST00000484259 CPN2P22792 545 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 AHCYP23526 432 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 CYP3A7P24462 503 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 CD1BP29016 333 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 CHRNA3P32297 505 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 GRK4P32298 578 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 SOAT1P35610 550 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 CAPGP40121 348 aa3.57□□□□□ -1.84
FXN-204ENST00000484259 ARL1P40616 181 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms