RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 PNPLA8Q9NP80 782 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 GRHL1Q9NZI5 618 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 DNPEPQ9ULA0 475 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 CLEC4EQ9ULY5 219 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 MYO18AQ92614 2054 aaKnown RBP7.12□□□□□ -1.27
BRCA1-216ENST00000484087 GPR179Q6PRD1 2367 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 MUC22E2RYF6 1773 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-216ENST00000484087 SLC12A8A0AV02 714 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 CFAP69A5D8W1 941 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 A6NNZ2 444 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 HMGB1P1B2RPK0 211 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 CHURC1-FNTBB4DL54 471 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 K7ESF4 209 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 AGPSO00116 658 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 TSPAN3O60637 253 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 ZNF189O75820 626 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 ENDOD1O94919 500 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 NFATC1O95644 943 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 F9P00740 461 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 IFNB1P01574 187 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 ADH5P11766 374 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 HNRNPLP14866 589 aaKnown RBP eCLIP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 CORO1AP31146 461 aaKnown RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 ATP5C1P36542 298 aaKnown RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 WASP42768 502 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 FNTBP49356 437 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 VPS41P49754 854 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 ITGA8P53708 1063 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 HDAC4P56524 1084 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 EIF3EP60228 445 aaKnown RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 DEUP1Q05D60 604 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 DPYSL3Q14195 570 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 OASLQ15646 514 aaKnown RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 ARL13BQ3SXY8 428 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 TUBB8Q3ZCM7 444 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 C2orf27AQ580R0 203 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 DCAF6Q58WW2 860 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 PPP6R3Q5H9R7 873 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 EFHC2Q5JST6 749 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 SH3PXD2AQ5TCZ1 1133 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 IZUMO3Q5VZ72 239 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 TRNP1Q6NT89 227 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 DARS2Q6PI48 645 aaKnown RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 ZDHHC24Q6UX98 284 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 ADGRG2Q8IZP9 1017 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 DCLK2Q8N568 766 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 CCDC33Q8N5R6 958 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 ARFGAP2Q8N6H7 521 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 SLC35B2Q8TB61 432 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 IRGQQ8WZA9 623 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 CENPIQ92674 756 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 EXOC4Q96A65 974 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 MYEOVQ96EZ4 313 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 RNF157Q96PX1 679 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 PEBP4Q96S96 227 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 FAM118BQ9BPY3 351 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 CCDC77Q9BR77 488 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 SNRNP25Q9BV90 132 aaKnown RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 STMN4Q9H169 189 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 DHX35Q9H5Z1 703 aaKnown RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 FAM204AQ9H8W3 233 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 PRMT8Q9NR22 394 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 TMEM51Q9NW97 253 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 RCOR3Q9P2K3 495 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 TPX2Q9ULW0 747 aaKnown RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 AP4E1Q9UPM8 1137 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 MRPS17Q9Y2R5 130 aaKnown RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 NYNRINQ9P2P1 1898 aaKnown RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 ZNF292O60281 2723 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 SDK1Q7Z5N4 2213 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 SYNJ2BP-COX16A0A087WUM0 186 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 GOLGA6L7A0A1B0GV03 622 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 PRR23AA6NEV1 266 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 H3BRJ5 948 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 H7C0C1 242 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 K7EQS6 105 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 M0QYT0 321 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 DNALI1O14645 258 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 LTFP02788 710 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 FYNP06241 537 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 CD48P09326 243 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 NUDT17P0C025 328 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 RBP3P10745 1247 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 NCAM1P13591 858 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 TCF3P15923 654 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 NBL1P41271 181 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 RPS9P46781 194 aaKnown RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 ATP5OP48047 213 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 PPP3CCP48454 512 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 NR2C2P49116 596 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 TUBP50607 506 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 ZNF135P52742 658 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 ADCY2Q08462 1091 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 GRSF1Q12849 480 aaKnown RBP eCLIP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 GPS1Q13098 491 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 MORF4L2Q15014 288 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 NOMO1Q15155 1222 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 TERF2Q15554 542 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 DPYSL2Q16555 572 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 P3H1Q32P28 736 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms