RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 WDR5P61964 334 aaKnown RBP13.48□□□□□ -0.25
CPNE1-225ENST00000483495 RAB33AQ14088 237 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 ZKSCAN8Q15776 578 aaPredicted RBP13.48□□□□□ -0.25
CPNE1-225ENST00000483495 PARP15Q460N3 678 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 SPOUT1Q5T280 376 aaKnown RBP13.48□□□□□ -0.25
CPNE1-225ENST00000483495 MROH9Q5TGP6 573 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 ARMC3Q5W041 872 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 CES3Q6UWW8 571 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 CDHR3Q6ZTQ4 885 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 DDX53Q86TM3 631 aaKnown RBP13.48□□□□□ -0.25
CPNE1-225ENST00000483495 GPR65Q8IYL9 337 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 OTUD6BQ8N6M0 293 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 SPOCK2Q92563 424 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 AZIN2Q96A70 460 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 ZNF669Q96BR6 464 aaPredicted RBP13.48□□□□□ -0.25
CPNE1-225ENST00000483495 ZNF512Q96ME7 567 aaPredicted RBP13.48□□□□□ -0.25
CPNE1-225ENST00000483495 RPRD1AQ96P16 312 aaPredicted RBP13.48□□□□□ -0.25
CPNE1-225ENST00000483495 CPNE1Q99829 537 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 APOL2Q9BQE5 337 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 SLC25A51Q9H1U9 297 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 KDM4CQ9H3R0 1056 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 ENTPD7Q9NQZ7 604 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 SPG21Q9NZD8 308 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 ZFATQ9P243 1243 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 PLLPQ9Y342 182 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 PSAT1Q9Y617 370 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 MRPL42Q9Y6G3 142 aaKnown RBP13.48□□□□□ -0.25
CPNE1-225ENST00000483495 DOCK4Q8N1I0 1966 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 SHROOM3Q8TF72 1996 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 TRIM43BA6NCK2 446 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 CCT8L1PA6NM43 557 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 MYO1CO00159 1063 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 ACSL4O60488 711 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 ERVK-10P10266 1014 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 CSF2RAP15509 400 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 CRHR1P34998 444 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 GP5P40197 560 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 MPP3Q13368 585 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 BTG3Q14201 252 aaPredicted RBP13.47□□□□□ -0.25
CPNE1-225ENST00000483495 HECTD3Q5T447 861 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 GRTP1Q5TC63 336 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 RANBP10Q6VN20 620 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 CCDC121Q6ZUS5 278 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 RASSF3Q86WH2 238 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 TRIM43Q96BQ3 446 aaPredicted RBP13.47□□□□□ -0.25
CPNE1-225ENST00000483495 MFSD3Q96ES6 412 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 MYEOVQ96EZ4 313 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 PAWRQ96IZ0 340 aaKnown RBP13.47□□□□□ -0.25
CPNE1-225ENST00000483495 FAM111AQ96PZ2 611 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 PLCD4Q9BRC7 762 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 C12orf65Q9H3J6 166 aaKnown RBP13.47□□□□□ -0.25
CPNE1-225ENST00000483495 SLC17A6Q9P2U8 582 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 MAFFQ9ULX9 164 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 PHTF1Q9UMS5 762 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 ARL2BPQ9Y2Y0 163 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 YIPF1Q9Y548 306 aa13.47□□□□□ -0.25
CPNE1-225ENST00000483495 ANKRD65E5RJM6 399 aa13.46□□□□□ -0.25
CPNE1-225ENST00000483495 J3KR12 359 aa13.46□□□□□ -0.25
CPNE1-225ENST00000483495 COCHO43405 550 aa13.46□□□□□ -0.25
CPNE1-225ENST00000483495 ATP9BO43861 1147 aa13.46□□□□□ -0.25
CPNE1-225ENST00000483495 RAMP2O60895 175 aa13.46□□□□□ -0.25
CPNE1-225ENST00000483495 PPP3CCP48454 512 aa13.46□□□□□ -0.25
CPNE1-225ENST00000483495 IL10RBQ08334 325 aa13.46□□□□□ -0.25
CPNE1-225ENST00000483495 SERINC3Q13530 473 aa13.46□□□□□ -0.25
CPNE1-225ENST00000483495 LACTB2Q53H82 288 aaPredicted RBP13.46□□□□□ -0.25
CPNE1-225ENST00000483495 FAM133BQ5BKY9 247 aaKnown RBP13.46□□□□□ -0.25
CPNE1-225ENST00000483495 PCID2Q5JVF3 399 aa13.46□□□□□ -0.25
CPNE1-225ENST00000483495 STXBP5Q5T5C0 1151 aa13.46□□□□□ -0.25
CPNE1-225ENST00000483495 MARC1Q5VT66 337 aa13.46□□□□□ -0.25
CPNE1-225ENST00000483495 POTEHQ6S545 545 aa13.46□□□□□ -0.25
CPNE1-225ENST00000483495 KDELC1Q6UW63 502 aa13.46□□□□□ -0.25
CPNE1-225ENST00000483495 TMCO2Q7Z6W1 182 aaPredicted RBP13.46□□□□□ -0.25
CPNE1-225ENST00000483495 PTCD2Q8WV60 388 aaKnown RBP13.46□□□□□ -0.25
CPNE1-225ENST00000483495 ISL2Q96A47 359 aa13.46□□□□□ -0.25
CPNE1-225ENST00000483495 PLD4Q96BZ4 506 aa13.46□□□□□ -0.25
CPNE1-225ENST00000483495 IMP4Q96G21 291 aaKnown RBP13.46□□□□□ -0.25
CPNE1-225ENST00000483495 MRGPRX2Q96LB1 330 aa13.46□□□□□ -0.25
CPNE1-225ENST00000483495 IQCGQ9H095 443 aaKnown RBP13.46□□□□□ -0.25
CPNE1-225ENST00000483495 CYP4F11Q9HBI6 524 aa13.46□□□□□ -0.25
CPNE1-225ENST00000483495 ARNT2Q9HBZ2 717 aa13.46□□□□□ -0.25
CPNE1-225ENST00000483495 MRM3Q9HC36 420 aaKnown RBP13.46□□□□□ -0.25
CPNE1-225ENST00000483495 CHRAC1Q9NRG0 131 aa13.46□□□□□ -0.25
CPNE1-225ENST00000483495 TRPM5Q9NZQ8 1165 aa13.46□□□□□ -0.25
CPNE1-225ENST00000483495 F5H5T6 163 aa13.46□□□□□ -0.26
CPNE1-225ENST00000483495 BAIAP3O94812 1187 aa13.46□□□□□ -0.26
CPNE1-225ENST00000483495 GJB5O95377 273 aa13.46□□□□□ -0.26
CPNE1-225ENST00000483495 ALDOAP04075 364 aaKnown RBP13.46□□□□□ -0.26
CPNE1-225ENST00000483495 URODP06132 367 aa13.46□□□□□ -0.26
CPNE1-225ENST00000483495 ITGA2BP08514 1039 aa13.46□□□□□ -0.26
CPNE1-225ENST00000483495 TPH1P17752 444 aa13.46□□□□□ -0.26
CPNE1-225ENST00000483495 ALDH1A3P47895 512 aa13.46□□□□□ -0.26
CPNE1-225ENST00000483495 HARS2P49590 506 aaKnown RBP13.46□□□□□ -0.26
CPNE1-225ENST00000483495 POLD3Q15054 466 aaPredicted RBP13.46□□□□□ -0.26
CPNE1-225ENST00000483495 TEDDM1Q5T9Z0 273 aa13.46□□□□□ -0.26
CPNE1-225ENST00000483495 RNF187Q5TA31 235 aaPredicted RBP13.46□□□□□ -0.26
CPNE1-225ENST00000483495 PKN3Q6P5Z2 889 aa13.46□□□□□ -0.26
CPNE1-225ENST00000483495 FAM47EQ6ZV65 393 aa13.46□□□□□ -0.26
CPNE1-225ENST00000483495 NDUFAF2Q8N183 169 aa13.46□□□□□ -0.26
CPNE1-225ENST00000483495 IPMKQ8NFU5 416 aa13.46□□□□□ -0.26
CPNE1-225ENST00000483495 PSMG2Q969U7 264 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms