RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 MCF2LO15068 1137 aa16.61■□□□□ 0.25
COL2A1-206ENST00000483376 DAPK3O43293 454 aa16.61■□□□□ 0.25
COL2A1-206ENST00000483376 RASA4O43374 803 aa16.61■□□□□ 0.25
COL2A1-206ENST00000483376 ZNF821O75541 412 aaPredicted RBP16.61■□□□□ 0.25
COL2A1-206ENST00000483376 RHOBTB1O94844 696 aa16.61■□□□□ 0.25
COL2A1-206ENST00000483376 CDH6P55285 790 aa16.61■□□□□ 0.25
COL2A1-206ENST00000483376 SFSWAPQ12872 951 aaKnown RBP16.61■□□□□ 0.25
COL2A1-206ENST00000483376 ELF2Q15723 593 aa16.61■□□□□ 0.25
COL2A1-206ENST00000483376 PMS2CLQ68D20 193 aa16.61■□□□□ 0.25
COL2A1-206ENST00000483376 C22orf39Q6P5X5 142 aa16.61■□□□□ 0.25
COL2A1-206ENST00000483376 USP30Q70CQ3 517 aa16.61■□□□□ 0.25
COL2A1-206ENST00000483376 CEP68Q76N32 757 aa16.61■□□□□ 0.25
COL2A1-206ENST00000483376 DSG4Q86SJ6 1040 aa16.61■□□□□ 0.25
COL2A1-206ENST00000483376 MAP7D3Q8IWC1 876 aa16.61■□□□□ 0.25
COL2A1-206ENST00000483376 ARHGAP12Q8IWW6 846 aa16.61■□□□□ 0.25
COL2A1-206ENST00000483376 FAM131CQ96AQ9 280 aa16.61■□□□□ 0.25
COL2A1-206ENST00000483376 HMCESQ96FZ2 354 aa16.61■□□□□ 0.25
COL2A1-206ENST00000483376 PCED1AQ9H1Q7 454 aa16.61■□□□□ 0.25
COL2A1-206ENST00000483376 DUSP15Q9H1R2 295 aaPredicted RBP16.61■□□□□ 0.25
COL2A1-206ENST00000483376 PCDHGA5Q9Y5G8 931 aa16.61■□□□□ 0.25
COL2A1-206ENST00000483376 SPAG17Q6Q759 2223 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 RCCD1A6NED2 376 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 ARHGAP42A6NI28 874 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 ARHGAP6O43182 974 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 BUB1BO60566 1050 aaPredicted RBP16.6■□□□□ 0.25
COL2A1-206ENST00000483376 LRP3O75074 770 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 ADH1BP00325 375 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 DNTTP04053 509 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 RETP07949 1114 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 ACADMP11310 421 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 GLDCP23378 1020 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 SERPINB6P35237 376 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 TPMTP51580 245 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 DPYSL3Q14195 570 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 KRT81Q14533 505 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 TTC31Q49AM3 519 aaPredicted RBP16.6■□□□□ 0.25
COL2A1-206ENST00000483376 TMCO3Q6UWJ1 677 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 KIAA1324Q6UXG2 1013 aaKnown RBP16.6■□□□□ 0.25
COL2A1-206ENST00000483376 ASCL5Q7RTU5 278 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 KBTBD6Q86V97 674 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 CPNE8Q86YQ8 564 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 LRRC49Q8IUZ0 686 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 RHOT1Q8IXI2 618 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 OR2A12Q8NGT7 310 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 OR8D1Q8WZ84 308 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 SLC6A17Q9H1V8 727 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 MTG2Q9H4K7 406 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 PDFQ9HBH1 243 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 WSB2Q9NYS7 404 aaPredicted RBP16.6■□□□□ 0.25
COL2A1-206ENST00000483376 MBD1Q9UIS9 605 aaPredicted RBP16.6■□□□□ 0.25
COL2A1-206ENST00000483376 PPM1HQ9ULR3 514 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 FAM186AA6NE01 2351 aa16.6■□□□□ 0.25
COL2A1-206ENST00000483376 K7ERQ8 282 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 SMAD6O43541 496 aaKnown RBP16.59■□□□□ 0.25
COL2A1-206ENST00000483376 PSTPIP1O43586 416 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 PRAMEF11O60813 436 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 C5AR1P21730 350 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 CD6P30203 668 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 SSR1P43307 286 aaKnown RBP16.59■□□□□ 0.25
COL2A1-206ENST00000483376 NOP2P46087 812 aaKnown RBP16.59■□□□□ 0.25
COL2A1-206ENST00000483376 CST6Q15828 149 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 ACCSLQ4AC99 568 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 FAM46CQ5VWP2 391 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 LINGO4Q6UY18 593 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 PRR23BQ6ZRT6 265 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 Q6ZVU0 165 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 STK40Q8N2I9 435 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 FAM160A2Q8N612 972 aaPredicted RBP16.59■□□□□ 0.25
COL2A1-206ENST00000483376 NPWQ8N729 165 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 ACRBPQ8NEB7 543 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 CADM4Q8NFZ8 388 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 TPCN2Q8NHX9 752 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 RLN3Q8WXF3 142 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 RUBCNQ92622 972 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 SLC39A8Q9C0K1 460 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 LACRTQ9GZZ8 138 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 PABPC3Q9H361 631 aaKnown RBP16.59■□□□□ 0.25
COL2A1-206ENST00000483376 DDX56Q9NY93 547 aaKnown RBP16.59■□□□□ 0.25
COL2A1-206ENST00000483376 SALL4Q9UJQ4 1053 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 FZD4Q9ULV1 537 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 FARP1Q9Y4F1 1045 aaPredicted RBP16.59■□□□□ 0.25
COL2A1-206ENST00000483376 ALG6Q9Y672 507 aa16.59■□□□□ 0.25
COL2A1-206ENST00000483376 EP300Q09472 2414 aaPredicted RBP16.59■□□□□ 0.25
COL2A1-206ENST00000483376 GVINP1Q7Z2Y8 2422 aa16.58■□□□□ 0.25
COL2A1-206ENST00000483376 C10orf142B7Z368 130 aa16.58■□□□□ 0.24
COL2A1-206ENST00000483376 GFRA3O60609 400 aa16.58■□□□□ 0.24
COL2A1-206ENST00000483376 EPN2O95208 641 aa16.58■□□□□ 0.24
COL2A1-206ENST00000483376 GSRP00390 522 aa16.58■□□□□ 0.24
COL2A1-206ENST00000483376 CD48P09326 243 aa16.58■□□□□ 0.24
COL2A1-206ENST00000483376 VAV1P15498 845 aa16.58■□□□□ 0.24
COL2A1-206ENST00000483376 BCKDHBP21953 392 aa16.58■□□□□ 0.24
COL2A1-206ENST00000483376 COMTP21964 271 aa16.58■□□□□ 0.24
COL2A1-206ENST00000483376 KDELR1P24390 212 aa16.58■□□□□ 0.24
COL2A1-206ENST00000483376 DPP6P42658 865 aa16.58■□□□□ 0.24
COL2A1-206ENST00000483376 MRE11P49959 708 aa16.58■□□□□ 0.24
COL2A1-206ENST00000483376 RFTN1Q14699 578 aaPredicted RBP16.58■□□□□ 0.24
COL2A1-206ENST00000483376 PAFAH1B3Q15102 231 aaKnown RBP16.58■□□□□ 0.24
COL2A1-206ENST00000483376 ATP13A4Q4VNC1 1196 aa16.58■□□□□ 0.24
COL2A1-206ENST00000483376 TMCO4Q5TGY1 634 aa16.58■□□□□ 0.24
COL2A1-206ENST00000483376 LPCAT2Q7L5N7 544 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms