RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 CHD5Q8TDI0 1954 aa20.35■□□□□ 0.85
TRAPPC12-220ENST00000482645 NYNRINQ9P2P1 1898 aaKnown RBP20.35■□□□□ 0.85
TRAPPC12-220ENST00000482645 WASH3PC4AMC7 463 aa20.34■□□□□ 0.85
TRAPPC12-220ENST00000482645 MRPS21P82921 87 aaKnown RBP20.34■□□□□ 0.85
TRAPPC12-220ENST00000482645 ARF5P84085 180 aa20.34■□□□□ 0.85
TRAPPC12-220ENST00000482645 KLF1Q13351 362 aaPredicted RBP20.34■□□□□ 0.85
TRAPPC12-220ENST00000482645 SERINC3Q13530 473 aa20.34■□□□□ 0.85
TRAPPC12-220ENST00000482645 PTPRNQ16849 979 aa20.34■□□□□ 0.85
TRAPPC12-220ENST00000482645 SERPINA13PQ6UXR4 307 aa20.34■□□□□ 0.85
TRAPPC12-220ENST00000482645 BBS12Q6ZW61 710 aa20.34■□□□□ 0.85
TRAPPC12-220ENST00000482645 SYNPOQ8N3V7 929 aa20.34■□□□□ 0.85
TRAPPC12-220ENST00000482645 ATPAF2Q8N5M1 289 aa20.34■□□□□ 0.85
TRAPPC12-220ENST00000482645 TXNDC5Q8NBS9 432 aaKnown RBP20.34■□□□□ 0.85
TRAPPC12-220ENST00000482645 LRRN4Q8WUT4 740 aa20.34■□□□□ 0.85
TRAPPC12-220ENST00000482645 ACDQ96AP0 544 aa20.34■□□□□ 0.85
TRAPPC12-220ENST00000482645 L2HGDHQ9H9P8 463 aa20.34■□□□□ 0.85
TRAPPC12-220ENST00000482645 DTLQ9NZJ0 730 aa20.34■□□□□ 0.85
TRAPPC12-220ENST00000482645 J3KR12 359 aa20.33■□□□□ 0.85
TRAPPC12-220ENST00000482645 KRIT1O00522 736 aa20.33■□□□□ 0.85
TRAPPC12-220ENST00000482645 KDELR3O43731 214 aa20.33■□□□□ 0.85
TRAPPC12-220ENST00000482645 MT-CO1P00395 513 aa20.33■□□□□ 0.85
TRAPPC12-220ENST00000482645 NNMTP40261 264 aa20.33■□□□□ 0.85
TRAPPC12-220ENST00000482645 IL12RB1P42701 662 aa20.33■□□□□ 0.85
TRAPPC12-220ENST00000482645 SLC10A2Q12908 348 aaPredicted RBP20.33■□□□□ 0.85
TRAPPC12-220ENST00000482645 ACCSLQ4AC99 568 aa20.33■□□□□ 0.85
TRAPPC12-220ENST00000482645 RETSATQ6NUM9 610 aa20.33■□□□□ 0.85
TRAPPC12-220ENST00000482645 IL17RCQ8NAC3 791 aa20.33■□□□□ 0.85
TRAPPC12-220ENST00000482645 ATP11CQ8NB49 1132 aa20.33■□□□□ 0.85
TRAPPC12-220ENST00000482645 CLDN23Q96B33 292 aa20.33■□□□□ 0.85
TRAPPC12-220ENST00000482645 FAM118BQ9BPY3 351 aa20.33■□□□□ 0.85
TRAPPC12-220ENST00000482645 POLR3BQ9NW08 1133 aaPredicted RBP20.33■□□□□ 0.85
TRAPPC12-220ENST00000482645 THAP10Q9P2Z0 257 aaPredicted RBP20.33■□□□□ 0.85
TRAPPC12-220ENST00000482645 SLCO3A1Q9UIG8 710 aa20.33■□□□□ 0.85
TRAPPC12-220ENST00000482645 EFR3BQ9Y2G0 817 aa20.33■□□□□ 0.85
TRAPPC12-220ENST00000482645 ZDBF2Q9HCK1 2354 aa20.33■□□□□ 0.85
TRAPPC12-220ENST00000482645 GOLGA6L10A0A0M3HER8 536 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 K7ERQ8 282 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 ZMPSTE24O75844 475 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 HLA-EP13747 358 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 PECAM1P16284 738 aaPredicted RBP20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 C2orf54Q08AI8 447 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 GAS6Q14393 721 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 SDE2Q6IQ49 451 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 TRMT11Q7Z4G4 463 aaKnown RBP20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 CCNYQ8ND76 341 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 MAIP1Q8WWC4 291 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 P3H4Q92791 437 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 MRGPRX3Q96LB0 322 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 CARD6Q9BX69 1037 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 PRDM16Q9HAZ2 1276 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 IPO11Q9UI26 975 aaKnown RBP20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 R3HDM2Q9Y2K5 976 aaKnown RBP20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 STON1Q9Y6Q2 735 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 CUL9Q8IWT3 2517 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 SHROOM3Q8TF72 1996 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 SGK1O00141 431 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 SRPRAP08240 638 aaKnown RBP20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 HNRNPLP14866 589 aaKnown RBP eCLIP20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 TGM2P21980 687 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 NTSR1P30989 418 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 RPS9P46781 194 aaKnown RBP20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 CLCN5P51795 746 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 GALNT2Q10471 571 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 SIX1Q15475 284 aaPredicted RBP20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 FBXL6Q8N531 539 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 KCNV2Q8TDN2 545 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 CHRDQ9H2X0 955 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 RAD54BQ9Y620 910 aa20.32■□□□□ 0.84
TRAPPC12-220ENST00000482645 TTC34A8MYJ7 566 aa20.31■□□□□ 0.84
TRAPPC12-220ENST00000482645 BNIP3LO60238 219 aa20.31■□□□□ 0.84
TRAPPC12-220ENST00000482645 EPHX1P07099 455 aa20.31■□□□□ 0.84
TRAPPC12-220ENST00000482645 CHRM1P11229 460 aaPredicted RBP20.31■□□□□ 0.84
TRAPPC12-220ENST00000482645 SRCP12931 536 aa20.31■□□□□ 0.84
TRAPPC12-220ENST00000482645 HOXB2P14652 356 aa20.31■□□□□ 0.84
TRAPPC12-220ENST00000482645 MX2P20592 715 aa20.31■□□□□ 0.84
TRAPPC12-220ENST00000482645 PRKCHP24723 683 aa20.31■□□□□ 0.84
TRAPPC12-220ENST00000482645 GARSP41250 739 aaKnown RBP20.31■□□□□ 0.84
TRAPPC12-220ENST00000482645 MTAPQ13126 283 aa20.31■□□□□ 0.84
TRAPPC12-220ENST00000482645 E2F5Q15329 346 aa20.31■□□□□ 0.84
TRAPPC12-220ENST00000482645 B4GALNT4Q76KP1 1039 aa20.31■□□□□ 0.84
TRAPPC12-220ENST00000482645 SH2D3CQ8N5H7 860 aa20.31■□□□□ 0.84
TRAPPC12-220ENST00000482645 CEP112Q8N8E3 955 aa20.31■□□□□ 0.84
TRAPPC12-220ENST00000482645 TMEM105Q8N8V8 129 aa20.31■□□□□ 0.84
TRAPPC12-220ENST00000482645 ATG4AQ8WYN0 398 aa20.31■□□□□ 0.84
TRAPPC12-220ENST00000482645 MYO19Q96H55 970 aa20.31■□□□□ 0.84
TRAPPC12-220ENST00000482645 MTG2Q9H4K7 406 aa20.31■□□□□ 0.84
TRAPPC12-220ENST00000482645 C11orf16Q9NQ32 467 aa20.31■□□□□ 0.84
TRAPPC12-220ENST00000482645 FCF1Q9Y324 198 aaKnown RBP20.31■□□□□ 0.84
TRAPPC12-220ENST00000482645 MUC22E2RYF6 1773 aaPredicted RBP20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 ZSCAN5CA6NGD5 496 aaPredicted RBP20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 APOC4-APOC2K7ER74 178 aa20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 SMAD6O43541 496 aaKnown RBP20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 PRAMEF11O60813 436 aa20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 ADAM23O75077 832 aa20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 ATG13O75143 517 aa20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 APOC2P02655 101 aa20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 SERPINH1P50454 418 aaKnown RBP20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 OTUD4Q01804 1114 aaKnown RBP20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 EOGTQ5NDL2 527 aa20.3■□□□□ 0.84
TRAPPC12-220ENST00000482645 ZNF572Q7Z3I7 529 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms