RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 VANGL2Q9ULK5 521 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 POMPQ9Y244 141 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 A0A096LPK6 155 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 GOLGA8TH3BQL2 631 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 CCL5P13501 91 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 LILRA4P59901 499 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 CUL3Q13618 768 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 CCDC153Q494R4 210 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 CLEC20AQ6ZU45 233 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.16■□□□□ 0.02
ATG4B-220ENST00000482507 MCMBPQ9BTE3 642 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 LRRC40Q9H9A6 602 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 WDR6Q9NNW5 1121 aaKnown RBP15.16■□□□□ 0.02
ATG4B-220ENST00000482507 PACSIN3Q9UKS6 424 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 SNX10Q9Y5X0 201 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 PDCD11Q14690 1871 aaKnown RBP15.16■□□□□ 0.02
ATG4B-220ENST00000482507 AHCYL1O43865 530 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 CHRNGP07510 517 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 CTSHP09668 335 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 HSPA1AP0DMV8 641 aaKnown RBP15.16■□□□□ 0.02
ATG4B-220ENST00000482507 HSPA1BP0DMV9 641 aaKnown RBP15.16■□□□□ 0.02
ATG4B-220ENST00000482507 COX4I1P13073 169 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 NPR3P17342 541 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 TPH1P17752 444 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 CST5P28325 142 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-220ENST00000482507 ADRA1BP35368 520 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 GARSP41250 739 aaKnown RBP15.16■□□□□ 0.02
ATG4B-220ENST00000482507 TAF6P49848 677 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 SERPINB8P50452 374 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 ZBTB17Q13105 803 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 SEMA3BQ13214 749 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 UBXN11Q5T124 520 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 PDSS2Q86YH6 399 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 SLC7A14Q8TBB6 771 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 CASS4Q9NQ75 786 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 CHRAC1Q9NRG0 131 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 TMEM30AQ9NV96 361 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 CPSF2Q9P2I0 782 aaKnown RBP15.16■□□□□ 0.02
ATG4B-220ENST00000482507 ADAM28Q9UKQ2 775 aa15.16■□□□□ 0.02
ATG4B-220ENST00000482507 SMIM35A0A1B0GVV1 85 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 ATP9BO43861 1147 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 HSPA4LO95757 839 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 CD4P01730 458 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 C2P06681 752 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 MYL4P12829 197 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 PEX2P28328 305 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 SPRP35270 261 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-220ENST00000482507 ASPHQ12797 758 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 KLF10Q13118 480 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 HNRNPDQ14103 355 aaKnown RBP15.15■□□□□ 0.02
ATG4B-220ENST00000482507 GPRIN1Q7Z2K8 1008 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 CMTM5Q96DZ9 223 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 ZNF560Q96MR9 790 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 GATA5Q9BWX5 397 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-220ENST00000482507 PIN4Q9Y237 131 aaKnown RBP15.15■□□□□ 0.02
ATG4B-220ENST00000482507 TRIP12Q14669 1992 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-220ENST00000482507 GOLGA8QA0A0J9YX86 632 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 GOLGA8OA6NCC3 632 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 YJEFN3A6XGL0 299 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 GOLGA8NF8WBI6 632 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 H3BNX3 289 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 HUS1O60921 280 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 SBK3P0C264 359 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 PTPN1P18031 435 aaKnown RBP15.15■□□□□ 0.02
ATG4B-220ENST00000482507 TKTL1P51854 596 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 MAP3K7CLP57077 242 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 TBL3Q12788 808 aaKnown RBP15.15■□□□□ 0.02
ATG4B-220ENST00000482507 XKR4Q5GH76 650 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 WSCD1Q658N2 575 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 TMEM151AQ8N4L1 468 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 DNAAF3Q8N9W5 541 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 URGCPQ8TCY9 931 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 TNIP3Q96KP6 325 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 GLT1D1Q96MS3 346 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 LENG8Q96PV6 779 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-220ENST00000482507 TRPV6Q9H1D0 765 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 PRDM16Q9HAZ2 1276 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 PAPOLBQ9NRJ5 636 aaKnown RBP15.15■□□□□ 0.02
ATG4B-220ENST00000482507 SPATS2LQ9NUQ6 558 aaKnown RBP15.15■□□□□ 0.02
ATG4B-220ENST00000482507 UBP1Q9NZI7 540 aa15.15■□□□□ 0.02
ATG4B-220ENST00000482507 A0A1W2PQ45 241 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-220ENST00000482507 A0A1W2PQY0 241 aa15.14■□□□□ 0.01
ATG4B-220ENST00000482507 CCDC78A2IDD5 438 aa15.14■□□□□ 0.01
ATG4B-220ENST00000482507 KCNE1P15382 129 aa15.14■□□□□ 0.01
ATG4B-220ENST00000482507 GLDCP23378 1020 aa15.14■□□□□ 0.01
ATG4B-220ENST00000482507 WARSP23381 471 aaKnown RBP15.14■□□□□ 0.01
ATG4B-220ENST00000482507 MPSTP25325 297 aa15.14■□□□□ 0.01
ATG4B-220ENST00000482507 HOXC8P31273 242 aa15.14■□□□□ 0.01
ATG4B-220ENST00000482507 NUMBP49757 651 aa15.14■□□□□ 0.01
ATG4B-220ENST00000482507 CDK7P50613 346 aa15.14■□□□□ 0.01
ATG4B-220ENST00000482507 AQP4P55087 323 aa15.14■□□□□ 0.01
ATG4B-220ENST00000482507 PPP1R36Q96LQ0 422 aa15.14■□□□□ 0.01
ATG4B-220ENST00000482507 ULBP1Q9BZM6 244 aa15.14■□□□□ 0.01
ATG4B-220ENST00000482507 WDR55Q9H6Y2 383 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-220ENST00000482507 PAK6Q9NQU5 681 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-220ENST00000482507 BFARQ9NZS9 450 aa15.14■□□□□ 0.01
ATG4B-220ENST00000482507 NFKB1P19838 968 aa15.14■□□□□ 0.01
ATG4B-220ENST00000482507 NMBRP28336 390 aa15.14■□□□□ 0.01
ATG4B-220ENST00000482507 PPIDQ08752 370 aaKnown RBP15.14■□□□□ 0.01
ATG4B-220ENST00000482507 PPM1LQ5SGD2 360 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms