RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 SERPINB11Q96P15 392 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 KLHL5Q96PQ7 755 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 XAB2Q9HCS7 855 aaKnown RBP14.73□□□□□ -0.05
CHD3-211ENST00000481999 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.73□□□□□ -0.05
CHD3-211ENST00000481999 TANC1Q9C0D5 1861 aa14.73□□□□□ -0.05
CHD3-211ENST00000481999 SDR42E2A6NKP2 422 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 DNAJC6O75061 913 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 HAUS5O94927 633 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 HAPLN1P10915 354 aaPredicted RBP14.72□□□□□ -0.05
CHD3-211ENST00000481999 SERPINB6P35237 376 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 SERPINB4P48594 390 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 MAXP61244 160 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 PPP2R5DQ14738 602 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 CFAP52Q8N1V2 620 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 ATPAF2Q8N5M1 289 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 PNPLA1Q8N8W4 532 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 MAB21L3Q8N8X9 362 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 SLC39A13Q96H72 371 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 HAPLN3Q96S86 360 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 MECRQ9BV79 373 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 FBXO44Q9H4M3 255 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 CHRAC1Q9NRG0 131 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 MARCH2Q9P0N8 246 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 HEY2Q9UBP5 337 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 RPS6KL1Q9Y6S9 549 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 PLXNA3P51805 1871 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 SLC12A8A0AV02 714 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 J3KR12 359 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 SEC24AO95486 1093 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 ACRP10323 421 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 CALB2P22676 271 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 PAPOLAP51003 745 aaKnown RBP14.72□□□□□ -0.05
CHD3-211ENST00000481999 MLLT6P55198 1093 aaPredicted RBP14.72□□□□□ -0.05
CHD3-211ENST00000481999 BRMS1LQ5PSV4 323 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 SPOUT1Q5T280 376 aaKnown RBP14.72□□□□□ -0.05
CHD3-211ENST00000481999 KCTD11Q693B1 232 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 PDZD4Q76G19 769 aaPredicted RBP14.72□□□□□ -0.05
CHD3-211ENST00000481999 ANKRD33Q7Z3H0 272 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 LRRC43Q8N309 656 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 ZNF333Q96JL9 665 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 TEKT5Q96M29 485 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 SRPK1Q96SB4 655 aaKnown RBP14.72□□□□□ -0.05
CHD3-211ENST00000481999 AGAP2Q99490 1192 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 GBA3Q9H227 469 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 CWH43Q9H720 699 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 MOCS1Q9NZB8 636 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 TLR6Q9Y2C9 796 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 ACTL7AQ9Y615 435 aa14.72□□□□□ -0.05
CHD3-211ENST00000481999 FAM159BA6NKW6 160 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 OR6C75A6NL08 312 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 CCDC22O60826 627 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 AP2A1O95782 977 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 CXCL10P02778 98 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 COL6A1P12109 1028 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 BGNP21810 368 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 CDK16Q00536 496 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 RFWD3Q6PCD5 774 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 TRIM42Q8IWZ5 723 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 TTC16Q8NEE8 873 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 ARMC5Q96C12 935 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 TMEM120AQ9BXJ8 343 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 PRDM5Q9NQX1 630 aaPredicted RBP14.71□□□□□ -0.05
CHD3-211ENST00000481999 BATF3Q9NR55 127 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 PCMTD2Q9NV79 361 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 DOCK4Q8N1I0 1966 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 SPTBN5Q9NRC6 3674 aaKnown RBP14.71□□□□□ -0.05
CHD3-211ENST00000481999 COL4A6Q14031 1691 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 TLR5O60602 858 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 PEX11AO75192 247 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 RFPL1O75677 317 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 GJB5O95377 273 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 HLA-DQB2P05538 268 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 DLDP09622 509 aaKnown RBP14.71□□□□□ -0.05
CHD3-211ENST00000481999 CSF2RAP15509 400 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 MX2P20592 715 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 PAX3P23760 479 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 IRX4P78413 519 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 ZBTB16Q05516 673 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 FBXL22Q6P050 247 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 IPMKQ8NFU5 416 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 FERMT1Q9BQL6 677 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 KCNK13Q9HB14 408 aa14.71□□□□□ -0.05
CHD3-211ENST00000481999 KRT38O76015 456 aa14.7□□□□□ -0.06
CHD3-211ENST00000481999 SPATA31D3P0C874 917 aa14.7□□□□□ -0.06
CHD3-211ENST00000481999 MAGEA11P43364 429 aa14.7□□□□□ -0.06
CHD3-211ENST00000481999 CHRNA4P43681 627 aa14.7□□□□□ -0.06
CHD3-211ENST00000481999 IHHQ14623 411 aa14.7□□□□□ -0.06
CHD3-211ENST00000481999 SPATA31D4Q6ZUB0 917 aa14.7□□□□□ -0.06
CHD3-211ENST00000481999 BEND5Q7L4P6 421 aa14.7□□□□□ -0.06
CHD3-211ENST00000481999 ZNF354CQ86Y25 554 aa14.7□□□□□ -0.06
CHD3-211ENST00000481999 ZNF683Q8IZ20 524 aa14.7□□□□□ -0.06
CHD3-211ENST00000481999 SKA1Q96BD8 255 aa14.7□□□□□ -0.06
CHD3-211ENST00000481999 ZNF669Q96BR6 464 aaPredicted RBP14.7□□□□□ -0.06
CHD3-211ENST00000481999 MTBPQ96DY7 904 aa14.7□□□□□ -0.06
CHD3-211ENST00000481999 HMCESQ96FZ2 354 aa14.7□□□□□ -0.06
CHD3-211ENST00000481999 ZNF570Q96NI8 536 aa14.7□□□□□ -0.06
CHD3-211ENST00000481999 NUDCD1Q96RS6 583 aa14.7□□□□□ -0.06
CHD3-211ENST00000481999 CLSTN3Q9BQT9 956 aa14.7□□□□□ -0.06
CHD3-211ENST00000481999 BRD8Q9H0E9 1235 aa14.7□□□□□ -0.06
CHD3-211ENST00000481999 TMEM39AQ9NV64 488 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms