RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 CD27P26842 260 aa17.4■□□□□ 0.38
HSPG2-209ENST00000480900 L1CAMP32004 1257 aa17.4■□□□□ 0.38
HSPG2-209ENST00000480900 DRD3P35462 400 aa17.4■□□□□ 0.38
HSPG2-209ENST00000480900 NOVA1P51513 510 aaKnown RBP17.4■□□□□ 0.38
HSPG2-209ENST00000480900 AFF3P51826 1226 aaKnown RBP17.4■□□□□ 0.38
HSPG2-209ENST00000480900 GALCP54803 685 aa17.4■□□□□ 0.38
HSPG2-209ENST00000480900 SLC20A2Q08357 652 aa17.4■□□□□ 0.38
HSPG2-209ENST00000480900 MAMLD1Q13495 774 aa17.4■□□□□ 0.38
HSPG2-209ENST00000480900 EFHC2Q5JST6 749 aa17.4■□□□□ 0.38
HSPG2-209ENST00000480900 FAM72AQ5TYM5 149 aa17.4■□□□□ 0.38
HSPG2-209ENST00000480900 FAM72DQ6L9T8 149 aa17.4■□□□□ 0.38
HSPG2-209ENST00000480900 RETSATQ6NUM9 610 aa17.4■□□□□ 0.38
HSPG2-209ENST00000480900 C22orf39Q6P5X5 142 aa17.4■□□□□ 0.38
HSPG2-209ENST00000480900 NCEH1Q6PIU2 408 aa17.4■□□□□ 0.38
HSPG2-209ENST00000480900 TMC6Q7Z403 805 aa17.4■□□□□ 0.38
HSPG2-209ENST00000480900 FAM72BQ86X60 149 aa17.4■□□□□ 0.38
HSPG2-209ENST00000480900 SYN2Q92777 582 aaPredicted RBP17.4■□□□□ 0.38
HSPG2-209ENST00000480900 FAM131CQ96AQ9 280 aa17.4■□□□□ 0.38
HSPG2-209ENST00000480900 SPON2Q9BUD6 331 aa17.4■□□□□ 0.38
HSPG2-209ENST00000480900 ATP13A1Q9HD20 1204 aa17.4■□□□□ 0.38
HSPG2-209ENST00000480900 TPX2Q9ULW0 747 aaKnown RBP17.4■□□□□ 0.38
HSPG2-209ENST00000480900 FARP1Q9Y4F1 1045 aaPredicted RBP17.4■□□□□ 0.38
HSPG2-209ENST00000480900 C10orf142B7Z368 130 aa17.39■□□□□ 0.37
HSPG2-209ENST00000480900 DDX3XO00571 662 aaKnown RBP eCLIP17.39■□□□□ 0.37
HSPG2-209ENST00000480900 SLC7A4O43246 635 aa17.39■□□□□ 0.37
HSPG2-209ENST00000480900 GJB3O75712 270 aa17.39■□□□□ 0.37
HSPG2-209ENST00000480900 FTLP02792 175 aaPredicted RBP17.39■□□□□ 0.37
HSPG2-209ENST00000480900 IGHV4-34P06331 123 aa17.39■□□□□ 0.37
HSPG2-209ENST00000480900 GLDCP23378 1020 aa17.39■□□□□ 0.37
HSPG2-209ENST00000480900 CCR5P51681 352 aa17.39■□□□□ 0.37
HSPG2-209ENST00000480900 ADPRHP54922 357 aa17.39■□□□□ 0.37
HSPG2-209ENST00000480900 OGDHQ02218 1023 aa17.39■□□□□ 0.37
HSPG2-209ENST00000480900 SEMA3BQ13214 749 aa17.39■□□□□ 0.37
HSPG2-209ENST00000480900 PSAPL1Q6NUJ1 521 aa17.39■□□□□ 0.37
HSPG2-209ENST00000480900 SCYL2Q6P3W7 929 aa17.39■□□□□ 0.37
HSPG2-209ENST00000480900 LINGO4Q6UY18 593 aa17.39■□□□□ 0.37
HSPG2-209ENST00000480900 OR2I1PQ8NGU4 316 aa17.39■□□□□ 0.37
HSPG2-209ENST00000480900 PIP4K2CQ8TBX8 421 aa17.39■□□□□ 0.37
HSPG2-209ENST00000480900 ORAI3Q9BRQ5 295 aa17.39■□□□□ 0.37
HSPG2-209ENST00000480900 ACE2Q9BYF1 805 aaPredicted RBP17.39■□□□□ 0.37
HSPG2-209ENST00000480900 MAGEB5Q9BZ81 275 aa17.39■□□□□ 0.37
HSPG2-209ENST00000480900 CEP44Q9C0F1 390 aa17.39■□□□□ 0.37
HSPG2-209ENST00000480900 MAGEH1Q9H213 219 aa17.39■□□□□ 0.37
HSPG2-209ENST00000480900 SARDHQ9UL12 918 aa17.39■□□□□ 0.37
HSPG2-209ENST00000480900 FZD10Q9ULW2 581 aa17.39■□□□□ 0.37
HSPG2-209ENST00000480900 BZW2Q9Y6E2 419 aaKnown RBP17.39■□□□□ 0.37
HSPG2-209ENST00000480900 FAM47DPA6NHR8 397 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 K7ERQ8 282 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 ATMINO43313 823 aaPredicted RBP17.38■□□□□ 0.37
HSPG2-209ENST00000480900 SMAD6O43541 496 aaKnown RBP17.38■□□□□ 0.37
HSPG2-209ENST00000480900 BNIP3LO60238 219 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 RTN2O75298 545 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 SKILP12757 684 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 CEACAM1P13688 526 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 GRIA4P48058 902 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 SERPINH1P50454 418 aaKnown RBP17.38■□□□□ 0.37
HSPG2-209ENST00000480900 METAP1P53582 386 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 SLC14A1Q13336 389 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 TEAD4Q15561 434 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 IL27RAQ6UWB1 636 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 PIP4P1Q86T03 277 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 OR2A12Q8NGT7 310 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 OR14C36Q8NHC7 312 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 FNIP1Q8TF40 1166 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 TRIM11Q96F44 468 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 EPAS1Q99814 870 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 KDM4CQ9H3R0 1056 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 TM9SF3Q9HD45 589 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 NDFIP2Q9NV92 336 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 IFNKQ9P0W0 207 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 SLCO1B1Q9Y6L6 691 aa17.38■□□□□ 0.37
HSPG2-209ENST00000480900 A0A1W2PPC4 97 aa17.37■□□□□ 0.37
HSPG2-209ENST00000480900 TMEM191CA6NGB0 347 aa17.37■□□□□ 0.37
HSPG2-209ENST00000480900 CER1O95813 267 aa17.37■□□□□ 0.37
HSPG2-209ENST00000480900 PRNPP04156 253 aa17.37■□□□□ 0.37
HSPG2-209ENST00000480900 MYBL1P10243 752 aa17.37■□□□□ 0.37
HSPG2-209ENST00000480900 PSMA2P25787 234 aa17.37■□□□□ 0.37
HSPG2-209ENST00000480900 CHRNA3P32297 505 aa17.37■□□□□ 0.37
HSPG2-209ENST00000480900 RECQLP46063 649 aaPredicted RBP17.37■□□□□ 0.37
HSPG2-209ENST00000480900 CSNK1EP49674 416 aaKnown RBP17.37■□□□□ 0.37
HSPG2-209ENST00000480900 GEMIN4P57678 1058 aaKnown RBP17.37■□□□□ 0.37
HSPG2-209ENST00000480900 ARF5P84085 180 aa17.37■□□□□ 0.37
HSPG2-209ENST00000480900 ZBED6P86452 979 aa17.37■□□□□ 0.37
HSPG2-209ENST00000480900 BNC1Q01954 994 aa17.37■□□□□ 0.37
HSPG2-209ENST00000480900 TDRD12Q587J7 1177 aaKnown RBP17.37■□□□□ 0.37
HSPG2-209ENST00000480900 N4BP2L1Q5TBK1 243 aaPredicted RBP17.37■□□□□ 0.37
HSPG2-209ENST00000480900 HGSNATQ68CP4 663 aa17.37■□□□□ 0.37
HSPG2-209ENST00000480900 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.37■□□□□ 0.37
HSPG2-209ENST00000480900 PYROXD2Q8N2H3 581 aa17.37■□□□□ 0.37
HSPG2-209ENST00000480900 PCDH20Q8N6Y1 951 aaKnown RBP17.37■□□□□ 0.37
HSPG2-209ENST00000480900 TMIEQ8NEW7 156 aa17.37■□□□□ 0.37
HSPG2-209ENST00000480900 ARHGEF2Q92974 986 aaKnown RBP17.37■□□□□ 0.37
HSPG2-209ENST00000480900 ZNF653Q96CK0 615 aa17.37■□□□□ 0.37
HSPG2-209ENST00000480900 ISCUQ9H1K1 167 aa17.37■□□□□ 0.37
HSPG2-209ENST00000480900 SLC32A1Q9H598 525 aa17.37■□□□□ 0.37
HSPG2-209ENST00000480900 CNOT8Q9UFF9 292 aaKnown RBP17.37■□□□□ 0.37
HSPG2-209ENST00000480900 DNAI1Q9UI46 699 aa17.37■□□□□ 0.37
HSPG2-209ENST00000480900 CAPN11Q9UMQ6 739 aa17.37■□□□□ 0.37
HSPG2-209ENST00000480900 SCINQ9Y6U3 715 aa17.37■□□□□ 0.37
HSPG2-209ENST00000480900 MAP1BP46821 2468 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms