RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 CCR1P32246 355 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 GBP1P32455 592 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 HTR7P34969 479 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 SOX5P35711 763 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 EIF4A3P38919 411 aaKnown RBP5.08□□□□□ -1.6
PTCD3-213ENST00000480102 PBX1P40424 430 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 PTPN9P43378 593 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 GALK1P51570 392 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 ZNF135P52742 658 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-213ENST00000480102 AIF1P55008 147 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 NOMO3P69849 1222 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 SLC6A3Q01959 620 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 ZBTB16Q05516 673 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 TNK2Q07912 1038 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 MTAPQ13126 283 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 BYSLQ13895 437 aaKnown RBP5.08□□□□□ -1.6
PTCD3-213ENST00000480102 DRAP1Q14919 205 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-213ENST00000480102 NR1I3Q14994 352 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 UBXN2BQ14CS0 331 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 EOGTQ5NDL2 527 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 BRMS1LQ5PSV4 323 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 C10orf120Q5SQS8 335 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 LY6G5CQ5SRR4 150 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 FSTL4Q6MZW2 842 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 SLC23A3Q6PIS1 610 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 OLFML1Q6UWY5 402 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 ZNF783Q6ZMS7 281 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 WDR5BQ86VZ2 330 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 PHF13Q86YI8 300 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-213ENST00000480102 BBS7Q8IWZ6 715 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 DHX40Q8IX18 779 aaKnown RBP5.08□□□□□ -1.6
PTCD3-213ENST00000480102 WDTC1Q8N5D0 677 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 FBXO27Q8NI29 283 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 DQX1Q8TE96 717 aaKnown RBP5.08□□□□□ -1.6
PTCD3-213ENST00000480102 WFIKKN2Q8TEU8 576 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 USP33Q8TEY7 942 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 FNIP1Q8TF40 1166 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 RNF139Q8WU17 664 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 UBE2Q2Q8WVN8 375 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 KAT5Q92993 513 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 BTN2A3PQ96KV6 586 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 HSPA12BQ96MM6 686 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 GABRG3Q99928 467 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 ULBP1Q9BZM6 244 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 TTYH3Q9C0H2 523 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 NACA2Q9H009 215 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 PCED1AQ9H1Q7 454 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 LINC00597Q9H2U6 94 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 ACBD3Q9H3P7 528 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 LMAN1LQ9HAT1 526 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 CAPN10Q9HC96 672 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 CD248Q9HCU0 757 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 TRPC7Q9HCX4 862 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 SEMA3GQ9NS98 782 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 DONSONQ9NYP3 566 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 REV1Q9UBZ9 1251 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 LCMT1Q9UIC8 334 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 AGO1Q9UL18 857 aaKnown RBP5.08□□□□□ -1.6
PTCD3-213ENST00000480102 MMP17Q9ULZ9 603 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 PCDHGA5Q9Y5G8 931 aa5.08□□□□□ -1.6
PTCD3-213ENST00000480102 SCN1AP35498 2009 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 MTCL1Q9Y4B5 1905 aaKnown RBP5.07□□□□□ -1.6
PTCD3-213ENST00000480102 PLXNA3P51805 1871 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 IGLV3-10A0A075B6K4 115 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 KRTAP4-8A0A0G2JLE6 195 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 KCNU1A8MYU2 1149 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 E5RJQ4 531 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 H3BS24 57 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 K7EQS6 105 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 TULP2O00295 520 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 THAP12O43422 761 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 ZNF217O75362 1048 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 TULP3O75386 442 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 DAB1O75553 588 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 ALDH1A2O94788 518 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 APBB3O95704 486 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 TBX18O95935 607 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 LMNAP02545 664 aaKnown RBP5.07□□□□□ -1.6
PTCD3-213ENST00000480102 ASLP04424 464 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 APODP05090 189 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 CALB1P05937 261 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 DCNP07585 359 aaKnown RBP5.07□□□□□ -1.6
PTCD3-213ENST00000480102 CISD3P0C7P0 127 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 MYBL1P10243 752 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 TYRP14679 529 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 ARSAP15289 507 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 SDHBP21912 280 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 CORO1AP31146 461 aaKnown RBP5.07□□□□□ -1.6
PTCD3-213ENST00000480102 MATKP42679 507 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 CXCR3P49682 368 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 PGFP49763 221 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 PLK1P53350 603 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 CDK17Q00537 523 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 UBXN1Q04323 297 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 SULT2A1Q06520 285 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 SCAPQ12770 1279 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 LRMPQ12912 555 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 TRIM14Q14142 442 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 ACAP1Q15027 740 aa5.07□□□□□ -1.6
PTCD3-213ENST00000480102 CRY1Q16526 586 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms