RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 CCDC3Q9BQI4 270 aa6.08□□□□□ -1.44
CPS1-207ENST00000479988 DRC3Q9H069 523 aa6.08□□□□□ -1.44
CPS1-207ENST00000479988 PHPT1Q9NRX4 125 aaPredicted RBP6.08□□□□□ -1.44
CPS1-207ENST00000479988 TXLNGQ9NUQ3 528 aa6.08□□□□□ -1.44
CPS1-207ENST00000479988 RBM22Q9NW64 420 aaKnown RBP eCLIP6.08□□□□□ -1.44
CPS1-207ENST00000479988 PSMC3IPQ9P2W1 217 aaPredicted RBP6.08□□□□□ -1.44
CPS1-207ENST00000479988 MID2Q9UJV3 735 aa6.08□□□□□ -1.44
CPS1-207ENST00000479988 ATXN2Q99700 1313 aaKnown RBP6.07□□□□□ -1.44
CPS1-207ENST00000479988 MAP1BP46821 2468 aaKnown RBP6.07□□□□□ -1.44
CPS1-207ENST00000479988 A0A1B0GVM2 712 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 TCAF2A6NFQ2 919 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 ACSL4O60488 711 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 SLC2A4P14672 509 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 PTGIRP43119 386 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 MAGEA11P43364 429 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 IRX4P78413 519 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 CREB5Q02930 508 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 XRCC4Q13426 336 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 DOK6Q6PKX4 331 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 VITQ6UXI7 678 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 PTAR1Q7Z6K3 402 aaPredicted RBP6.07□□□□□ -1.44
CPS1-207ENST00000479988 ZCCHC9Q8N567 271 aaKnown RBP6.07□□□□□ -1.44
CPS1-207ENST00000479988 TFB1MQ8WVM0 346 aaKnown RBP6.07□□□□□ -1.44
CPS1-207ENST00000479988 FOXJ1Q92949 421 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 SEC16BQ96JE7 1060 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 TMEM209Q96SK2 561 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 ELAC2Q9BQ52 826 aaKnown RBP6.07□□□□□ -1.44
CPS1-207ENST00000479988 KCTD5Q9NXV2 234 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 HACD3Q9P035 362 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 GGT7Q9UJ14 662 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 CNTN6Q9UQ52 1028 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 PYGLP06737 847 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 ITGAVP06756 1048 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 PTPN3P26045 913 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 CCR3P51677 355 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 POM121L1PQ3SYA9 428 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 FASTKD1Q53R41 847 aaKnown RBP6.07□□□□□ -1.44
CPS1-207ENST00000479988 BBS12Q6ZW61 710 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 WDR75Q8IWA0 830 aaKnown RBP6.07□□□□□ -1.44
CPS1-207ENST00000479988 ZBED8Q8IZ13 594 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 C12orf29Q8N999 325 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 LPCAT1Q8NF37 534 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 CALML6Q8TD86 181 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 LMAN1LQ9HAT1 526 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 OR12D3Q9UGF7 316 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 ARL2BPQ9Y2Y0 163 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 SIT1Q9Y3P8 196 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 GON4LQ3T8J9 2241 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 IRAK2O43187 625 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 HNRNPCL1O60812 293 aaKnown RBP6.07□□□□□ -1.44
CPS1-207ENST00000479988 TMCC1O94876 653 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 ESRRBO95718 433 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 MSH3P20585 1137 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 LRPAP1P30533 357 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 PBX2P40425 430 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 GPR1P46091 355 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 CSTF1Q05048 431 aaKnown RBP6.07□□□□□ -1.44
CPS1-207ENST00000479988 NSUN2Q08J23 767 aaKnown RBP eCLIP6.07□□□□□ -1.44
CPS1-207ENST00000479988 INSCQ1MX18 579 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 ERMARDQ5T6L9 678 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 PPP1R26Q5T8A7 1209 aaPredicted RBP6.07□□□□□ -1.44
CPS1-207ENST00000479988 FAXCQ5TGI0 409 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 ZNF776Q68DI1 518 aaPredicted RBP6.07□□□□□ -1.44
CPS1-207ENST00000479988 ANKRD54Q6NXT1 300 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 MFSD7Q6UXD7 560 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 MRPL10Q7Z7H8 261 aaKnown RBP6.07□□□□□ -1.44
CPS1-207ENST00000479988 CCNJLQ8IV13 435 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.07□□□□□ -1.44
CPS1-207ENST00000479988 NIPA2Q8N8Q9 360 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 VN1R2Q8NFZ6 395 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 CFAP61Q8NHU2 1237 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 SPPL3Q8TCT6 385 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 DDX1Q92499 740 aaKnown RBP6.07□□□□□ -1.44
CPS1-207ENST00000479988 ZNF516Q92618 1163 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 NKD2Q969F2 451 aaPredicted RBP6.07□□□□□ -1.44
CPS1-207ENST00000479988 CXorf40BQ96DE9 158 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 POLR1EQ9GZS1 481 aaKnown RBP6.07□□□□□ -1.44
CPS1-207ENST00000479988 BRD8Q9H0E9 1235 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 FAM96AQ9H5X1 160 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.07□□□□□ -1.44
CPS1-207ENST00000479988 FNIP2Q9P278 1114 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 TBK1Q9UHD2 729 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 LTBP1Q14766 1721 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 CDK5RAP2Q96SN8 1893 aa6.07□□□□□ -1.44
CPS1-207ENST00000479988 GREB1LQ9C091 1923 aaPredicted RBP6.07□□□□□ -1.44
CPS1-207ENST00000479988 APOC4-APOC2K7ER74 178 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 APOC2P02655 101 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 RPN2P04844 631 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 SERPIND1P05546 499 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 ANXA6P08133 673 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 DDX5P17844 614 aaKnown RBP6.06□□□□□ -1.44
CPS1-207ENST00000479988 MARCKSL1P49006 195 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 SERPINB9P50453 376 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 CDK7P50613 346 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 SKP1P63208 163 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 SLC20A2Q08357 652 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 RUNX3Q13761 415 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 SIM2Q14190 667 aaPredicted RBP6.06□□□□□ -1.44
CPS1-207ENST00000479988 ATG16L1Q676U5 607 aa6.06□□□□□ -1.44
CPS1-207ENST00000479988 PPP4R4Q6NUP7 873 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms