RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 MRPL15Q9P015 296 aaKnown RBP7.82□□□□□ -1.16
GAPVD1-217ENST00000479511 INTS6Q9UL03 887 aaKnown RBP7.82□□□□□ -1.16
GAPVD1-217ENST00000479511 SUV39H1O43463 412 aa7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 TMPRSS11DO60235 418 aa7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 CEP104O60308 925 aa7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 C1RP00736 705 aa7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 PTPN9P43378 593 aa7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 SUMO2P61956 95 aaKnown RBP7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 PPARDQ03181 441 aa7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 ITIH3Q06033 890 aa7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 AIMP2Q13155 320 aaKnown RBP7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 TMEM88Q6PEY1 159 aa7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 FAM83HQ6ZRV2 1179 aaPredicted RBP7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 MFSD6Q6ZSS7 791 aa7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 GET4Q7L5D6 327 aaPredicted RBP7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 SLC46A3Q7Z3Q1 461 aa7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 GPR149Q86SP6 731 aa7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 LAS2Q8IYD9 372 aa7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 AVL9Q8NBF6 648 aa7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 TOR1AIP2Q8NFQ8 470 aa7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 JAKMIP1Q96N16 626 aaKnown RBP7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 CINPQ9BW66 212 aaPredicted RBP7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 ZWILCHQ9H900 591 aa7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 GRPEL1Q9HAV7 217 aa7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 C20orf141Q9NUB4 165 aa7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 SPATS2LQ9NUQ6 558 aaKnown RBP7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 CDH22Q9UJ99 828 aa7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 ZNF518AQ6AHZ1 1483 aa7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 LRRC9Q6ZRR7 1453 aa7.81□□□□□ -1.16
GAPVD1-217ENST00000479511 A8MZ25 164 aa7.8□□□□□ -1.16
GAPVD1-217ENST00000479511 PAGE4O60829 102 aa7.8□□□□□ -1.16
GAPVD1-217ENST00000479511 GALTP07902 379 aa7.8□□□□□ -1.16
GAPVD1-217ENST00000479511 DUSP1P28562 367 aa7.8□□□□□ -1.16
GAPVD1-217ENST00000479511 GJC1P36383 396 aa7.8□□□□□ -1.16
GAPVD1-217ENST00000479511 PDE1AP54750 535 aa7.8□□□□□ -1.16
GAPVD1-217ENST00000479511 FRG1Q14331 258 aaKnown RBP7.8□□□□□ -1.16
GAPVD1-217ENST00000479511 ZNF618Q5T7W0 954 aa7.8□□□□□ -1.16
GAPVD1-217ENST00000479511 GKAP1Q5VSY0 366 aaPredicted RBP7.8□□□□□ -1.16
GAPVD1-217ENST00000479511 TMEM154Q6P9G4 183 aa7.8□□□□□ -1.16
GAPVD1-217ENST00000479511 SIRT6Q8N6T7 355 aa7.8□□□□□ -1.16
GAPVD1-217ENST00000479511 NOC3LQ8WTT2 800 aaKnown RBP7.8□□□□□ -1.16
GAPVD1-217ENST00000479511 EDC3Q96F86 508 aaKnown RBP7.8□□□□□ -1.16
GAPVD1-217ENST00000479511 APOL6Q9BWW8 343 aa7.8□□□□□ -1.16
GAPVD1-217ENST00000479511 RABEP2Q9H5N1 569 aa7.8□□□□□ -1.16
GAPVD1-217ENST00000479511 SLC25A13Q9UJS0 675 aa7.8□□□□□ -1.16
GAPVD1-217ENST00000479511 A2ML1A8K2U0 1454 aa7.8□□□□□ -1.16
GAPVD1-217ENST00000479511 SRCAPQ6ZRS2 3230 aa7.8□□□□□ -1.16
GAPVD1-217ENST00000479511 KDM5CP41229 1560 aa7.8□□□□□ -1.16
GAPVD1-217ENST00000479511 FMN1Q68DA7 1419 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 RNASET2O00584 256 aaKnown RBP7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 FYB1O15117 783 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 CDKL5O76039 1030 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 NDUFA10O95299 355 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 ALDOCP09972 364 aaKnown RBP7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 SFPQP23246 707 aaKnown RBP eCLIP7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 TBXAS1P24557 533 aaPredicted RBP7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 ZFP36P26651 326 aaKnown RBP7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 STAT6P42226 847 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 TNNT3P45378 269 aaPredicted RBP7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 CLK3P49761 638 aaKnown RBP7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 TPTEP56180 551 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 PLIN5Q00G26 463 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 PCLAFQ15004 111 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 BEAN1Q3B7T3 259 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 Q6ZWC4 215 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 TMEM200AQ86VY9 491 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 ARHGAP12Q8IWW6 846 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 POC5Q8NA72 575 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 ZBTB8BQ8NAP8 495 aaPredicted RBP7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 CPEB3Q8NE35 698 aaKnown RBP7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 SRFBP1Q8NEF9 429 aaKnown RBP7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 GOT1L1Q8NHS2 421 aaPredicted RBP7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 POMGNT1Q8WZA1 660 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 SMARCE1Q969G3 411 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 GPR78Q96P69 363 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 SNX18Q96RF0 628 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 STRA6Q9BX79 667 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 EDEM3Q9BZQ6 932 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 KLHL4Q9C0H6 718 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 KLC2Q9H0B6 622 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 IKZF4Q9H2S9 585 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 SH2D4AQ9H788 454 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 LTB4R2Q9NPC1 389 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 UPB1Q9UBR1 384 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 SEL1LQ9UBV2 794 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 CCNL1Q9UK58 526 aaPredicted RBP7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 SH2B3Q9UQQ2 575 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 PKP3Q9Y446 797 aa7.79□□□□□ -1.16
GAPVD1-217ENST00000479511 NHSL1Q5SYE7 1610 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 C17orf113A0A1B0GUU1 675 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 NPEPPSL1A6NEC2 478 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 DSCR3O14972 297 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 CSPG5O95196 566 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 ZNF8P17098 575 aaPredicted RBP7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 GABRB1P18505 474 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 SLC8A1P32418 973 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 RAD23AP54725 363 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 NXPH1P58417 271 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 C1QTNF8P60827 252 aa7.78□□□□□ -1.16
GAPVD1-217ENST00000479511 PRAMEP78395 509 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms