RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 GRIK3Q13003 919 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 C16orf72Q14CZ0 275 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 DCLRE1AQ6PJP8 1040 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 ZBTB49Q6ZSB9 765 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 LPCAT2Q7L5N7 544 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 TMCO5AQ8N6Q1 288 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 SLC35B2Q8TB61 432 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 DDX1Q92499 740 aaKnown RBP14.54□□□□□ -0.08
COL20A1-206ENST00000479501 MECRQ9BV79 373 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 MRPL9Q9BYD2 267 aaKnown RBP14.54□□□□□ -0.08
COL20A1-206ENST00000479501 HMX1Q9NP08 348 aaPredicted RBP14.54□□□□□ -0.08
COL20A1-206ENST00000479501 SORCS3Q9UPU3 1222 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 MYH1P12882 1939 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 MEI4A8MW99 385 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 PROCP04070 461 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 EPHB3P54753 998 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 NOMO2Q5JPE7 1267 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 SPRYD7Q5W111 196 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 TXNRD3NBQ6F5E7 133 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 ANKS1BQ7Z6G8 1248 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 TDRPQ86YL5 185 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 LRRC49Q8IUZ0 686 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 KCTD15Q96SI1 283 aaPredicted RBP14.54□□□□□ -0.08
COL20A1-206ENST00000479501 SDCBP2Q9H190 292 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 MMADHCQ9H3L0 296 aaPredicted RBP14.54□□□□□ -0.08
COL20A1-206ENST00000479501 ZNF212Q9UDV6 495 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 TEKT2Q9UIF3 430 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 ZSCAN9O15535 394 aaPredicted RBP14.54□□□□□ -0.08
COL20A1-206ENST00000479501 MFSD11O43934 449 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 PQBP1O60828 265 aaKnown RBP14.54□□□□□ -0.08
COL20A1-206ENST00000479501 ATG7O95352 703 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 ASMTLO95671 621 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 MLNP12872 115 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 TCF4P15884 667 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 GDF10P55107 478 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 RETSATQ6NUM9 610 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 LZICQ8WZA0 190 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 FCRL2Q96LA5 508 aaPredicted RBP14.54□□□□□ -0.08
COL20A1-206ENST00000479501 TWNKQ96RR1 684 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 TAS2R13Q9NYV9 303 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 RAD54BQ9Y620 910 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 LTBP3Q9NS15 1303 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 BIRC5O15392 142 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 TSPAN3O60637 253 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 PSMA4P25789 261 aaKnown RBP14.54□□□□□ -0.08
COL20A1-206ENST00000479501 PTDSS1P48651 473 aaKnown RBP14.54□□□□□ -0.08
COL20A1-206ENST00000479501 NCALDP61601 193 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 SH3PXD2AQ5TCZ1 1133 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 RAP1GAP2Q684P5 730 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 SNX31Q8N9S9 440 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 CMASQ8NFW8 434 aaPredicted RBP14.54□□□□□ -0.08
COL20A1-206ENST00000479501 PCDH19Q8TAB3 1148 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 HNRNPABQ99729 332 aaKnown RBP14.54□□□□□ -0.08
COL20A1-206ENST00000479501 SCN3BQ9NY72 215 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 CRYL1Q9Y2S2 319 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 AHCYL1O43865 530 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 RPL14P50914 215 aaKnown RBP14.53□□□□□ -0.08
COL20A1-206ENST00000479501 HERC6Q8IVU3 1022 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 GDPD5Q8WTR4 605 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 SPOCK2Q92563 424 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 PAIP1Q9H074 479 aaKnown RBP14.53□□□□□ -0.08
COL20A1-206ENST00000479501 EXOSC4Q9NPD3 245 aaKnown RBP14.53□□□□□ -0.08
COL20A1-206ENST00000479501 CYLDQ9NQC7 956 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 ATXN2Q99700 1313 aaKnown RBP14.53□□□□□ -0.08
COL20A1-206ENST00000479501 ENTPD5O75356 428 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 ZBTB48P10074 688 aaPredicted RBP14.53□□□□□ -0.08
COL20A1-206ENST00000479501 LMO2P25791 158 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 IL1R2P27930 398 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 GSTT1P30711 240 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 FLT3LGP49771 235 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 TAS1R3Q7RTX0 852 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 SNX32Q86XE0 403 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 VPS50Q96JG6 964 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 ACE2Q9BYF1 805 aaPredicted RBP14.53□□□□□ -0.08
COL20A1-206ENST00000479501 GPR88Q9GZN0 384 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 ARHGEF4Q9NR80 690 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 FBXO6Q9NRD1 293 aaPredicted RBP14.53□□□□□ -0.08
COL20A1-206ENST00000479501 UBA2Q9UBT2 640 aaPredicted RBP14.53□□□□□ -0.08
COL20A1-206ENST00000479501 C4BP0C0L5 1744 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.53□□□□□ -0.08
COL20A1-206ENST00000479501 FAM155BO75949 473 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 RGS20O76081 388 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 MYL4P12829 197 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 HOXB8P17481 243 aaPredicted RBP14.53□□□□□ -0.08
COL20A1-206ENST00000479501 CYP3A5P20815 502 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 CD86P42081 329 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 SKIV2L2P42285 1042 aaKnown RBP14.53□□□□□ -0.08
COL20A1-206ENST00000479501 RUNX1T1Q06455 604 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 ILF2Q12905 390 aaKnown RBP14.53□□□□□ -0.08
COL20A1-206ENST00000479501 C1orf220Q5T0J3 134 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 ARHGAP17Q68EM7 881 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 MYO1HQ8N1T3 1032 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 LENG1Q96BZ8 264 aaPredicted RBP14.53□□□□□ -0.08
COL20A1-206ENST00000479501 OSBPL7Q9BZF2 842 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 RABGEF1Q9UJ41 708 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 ITGB4P16144 1822 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 MYH11P35749 1972 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 HNRNPCL2B2RXH8 293 aa14.53□□□□□ -0.08
COL20A1-206ENST00000479501 ATP5C1P36542 298 aaKnown RBP14.53□□□□□ -0.08
COL20A1-206ENST00000479501 GALNTL6Q49A17 601 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms