RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 PCDH20Q8N6Y1 951 aaKnown RBP15.81■□□□□ 0.12
C9orf3-217ENST00000479161 ATP11CQ8NB49 1132 aa15.81■□□□□ 0.12
C9orf3-217ENST00000479161 TSC1Q92574 1164 aa15.81■□□□□ 0.12
C9orf3-217ENST00000479161 FOXJ1Q92949 421 aa15.81■□□□□ 0.12
C9orf3-217ENST00000479161 ZNF419Q96HQ0 510 aaPredicted RBP15.81■□□□□ 0.12
C9orf3-217ENST00000479161 KCTD15Q96SI1 283 aaPredicted RBP15.81■□□□□ 0.12
C9orf3-217ENST00000479161 CWC15Q9P013 229 aaKnown RBP15.81■□□□□ 0.12
C9orf3-217ENST00000479161 NCDNQ9UBB6 729 aa15.81■□□□□ 0.12
C9orf3-217ENST00000479161 DNAI1Q9UI46 699 aa15.81■□□□□ 0.12
C9orf3-217ENST00000479161 FZD4Q9ULV1 537 aa15.81■□□□□ 0.12
C9orf3-217ENST00000479161 TPX2Q9ULW0 747 aaKnown RBP15.81■□□□□ 0.12
C9orf3-217ENST00000479161 NUMA1Q14980 2115 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 BTNL10A8MVZ5 291 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 GOLGA6L6A8MZA4 724 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 CBX4O00257 560 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 MAP3K13O43283 966 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 SNAP91O60641 907 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 NDUFA10O95299 355 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 IPO7O95373 1038 aaKnown RBP15.8■□□□□ 0.12
C9orf3-217ENST00000479161 CD160O95971 181 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 MT-CO1P00395 513 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 DNTTP04053 509 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 ERCC2P18074 760 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 ARSEP51690 589 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 GSDMDP57764 484 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 SERINC3Q13530 473 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 PDK2Q15119 407 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 CST6Q15828 149 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 PLA2G2CQ5R387 149 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 FAM46CQ5VWP2 391 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 PEAR1Q5VY43 1037 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-217ENST00000479161 IL31Q6EBC2 164 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 KIAA1324Q6UXG2 1013 aaKnown RBP15.8■□□□□ 0.12
C9orf3-217ENST00000479161 LRRC49Q8IUZ0 686 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 MAP7D3Q8IWC1 876 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 ZNF366Q8N895 744 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 TMIEQ8NEW7 156 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 RLN3Q8WXF3 142 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 OR8D1Q8WZ84 308 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 LRIG1Q96JA1 1093 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 BTBD6Q96KE9 485 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 SPON2Q9BUD6 331 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 KLC2Q9H0B6 622 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 PABPC3Q9H361 631 aaKnown RBP15.8■□□□□ 0.12
C9orf3-217ENST00000479161 SGK2Q9HBY8 427 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 OSGEPQ9NPF4 335 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 PPM1HQ9ULR3 514 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 PCDHA13Q9Y5I0 950 aa15.8■□□□□ 0.12
C9orf3-217ENST00000479161 BCLAF3A2AJT9 711 aaKnown RBP15.79■□□□□ 0.12
C9orf3-217ENST00000479161 C10orf142B7Z368 130 aa15.79■□□□□ 0.12
C9orf3-217ENST00000479161 RASA4BC9J798 803 aa15.79■□□□□ 0.12
C9orf3-217ENST00000479161 DCLK1O15075 740 aa15.79■□□□□ 0.12
C9orf3-217ENST00000479161 SLC7A4O43246 635 aa15.79■□□□□ 0.12
C9orf3-217ENST00000479161 DAPK3O43293 454 aa15.79■□□□□ 0.12
C9orf3-217ENST00000479161 RASA4O43374 803 aa15.79■□□□□ 0.12
C9orf3-217ENST00000479161 ZNF821O75541 412 aaPredicted RBP15.79■□□□□ 0.12
C9orf3-217ENST00000479161 GOT1P17174 413 aa15.79■□□□□ 0.12
C9orf3-217ENST00000479161 BCKDHBP21953 392 aa15.79■□□□□ 0.12
C9orf3-217ENST00000479161 TGM1P22735 817 aa15.79■□□□□ 0.12
C9orf3-217ENST00000479161 ACVRL1P37023 503 aa15.79■□□□□ 0.12
C9orf3-217ENST00000479161 CCDC15Q0P6D6 951 aa15.79■□□□□ 0.12
C9orf3-217ENST00000479161 CSRP2Q16527 193 aa15.79■□□□□ 0.12
C9orf3-217ENST00000479161 ACCSLQ4AC99 568 aa15.79■□□□□ 0.12
C9orf3-217ENST00000479161 PPP6R3Q5H9R7 873 aaPredicted RBP15.79■□□□□ 0.12
C9orf3-217ENST00000479161 RABEPKQ7Z6M1 372 aa15.79■□□□□ 0.12
C9orf3-217ENST00000479161 OR2A12Q8NGT7 310 aa15.79■□□□□ 0.12
C9orf3-217ENST00000479161 BAG1Q99933 345 aaPredicted RBP15.79■□□□□ 0.12
C9orf3-217ENST00000479161 KDM4CQ9H3R0 1056 aa15.79■□□□□ 0.12
C9orf3-217ENST00000479161 PCDH18Q9HCL0 1135 aa15.79■□□□□ 0.12
C9orf3-217ENST00000479161 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.79■□□□□ 0.12
C9orf3-217ENST00000479161 GPATCH2LQ9NWQ4 482 aa15.79■□□□□ 0.12
C9orf3-217ENST00000479161 NCKAP1Q9Y2A7 1128 aa15.79■□□□□ 0.12
C9orf3-217ENST00000479161 DCHS1Q96JQ0 3298 aa15.79■□□□□ 0.12
C9orf3-217ENST00000479161 ARHGAP42A6NI28 874 aa15.78■□□□□ 0.12
C9orf3-217ENST00000479161 NDUFS2O75306 463 aa15.78■□□□□ 0.12
C9orf3-217ENST00000479161 ZNF806P0C7X5 589 aa15.78■□□□□ 0.12
C9orf3-217ENST00000479161 TCF4P15884 667 aa15.78■□□□□ 0.12
C9orf3-217ENST00000479161 IL4RP24394 825 aa15.78■□□□□ 0.12
C9orf3-217ENST00000479161 SLC8A1P32418 973 aa15.78■□□□□ 0.12
C9orf3-217ENST00000479161 RPL6Q02878 288 aaKnown RBP15.78■□□□□ 0.12
C9orf3-217ENST00000479161 KCNT1Q5JUK3 1230 aa15.78■□□□□ 0.12
C9orf3-217ENST00000479161 TMCO4Q5TGY1 634 aa15.78■□□□□ 0.12
C9orf3-217ENST00000479161 C22orf39Q6P5X5 142 aa15.78■□□□□ 0.12
C9orf3-217ENST00000479161 TMEM139Q8IV31 216 aa15.78■□□□□ 0.12
C9orf3-217ENST00000479161 STK40Q8N2I9 435 aa15.78■□□□□ 0.12
C9orf3-217ENST00000479161 TXLNBQ8N3L3 684 aa15.78■□□□□ 0.12
C9orf3-217ENST00000479161 DNASE2BQ8WZ79 361 aa15.78■□□□□ 0.12
C9orf3-217ENST00000479161 FAF2Q96CS3 445 aa15.78■□□□□ 0.12
C9orf3-217ENST00000479161 TOE1Q96GM8 510 aaKnown RBP15.78■□□□□ 0.12
C9orf3-217ENST00000479161 CSPG4P5Q96PW8 444 aa15.78■□□□□ 0.12
C9orf3-217ENST00000479161 ZNF670Q9BS34 389 aa15.78■□□□□ 0.12
C9orf3-217ENST00000479161 BTBD1Q9H0C5 482 aa15.78■□□□□ 0.12
C9orf3-217ENST00000479161 SLC6A17Q9H1V8 727 aa15.78■□□□□ 0.12
C9orf3-217ENST00000479161 VPS45Q9NRW7 570 aa15.78■□□□□ 0.12
C9orf3-217ENST00000479161 CYP8B1Q9UNU6 501 aa15.78■□□□□ 0.12
C9orf3-217ENST00000479161 CEP250Q9BV73 2442 aa15.77■□□□□ 0.12
C9orf3-217ENST00000479161 C1QTNF3-AMACRE9PGA6 284 aa15.77■□□□□ 0.12
C9orf3-217ENST00000479161 PJA2O43164 708 aa15.77■□□□□ 0.12
C9orf3-217ENST00000479161 SMAD6O43541 496 aaKnown RBP15.77■□□□□ 0.12
C9orf3-217ENST00000479161 GSRP00390 522 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms