RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 M0QX08 132 aa21.57■■□□□ 1.04
SDF4-206ENST00000478938 SLC16A4O15374 487 aa21.57■■□□□ 1.04
SDF4-206ENST00000478938 BMP2P12643 396 aa21.57■■□□□ 1.04
SDF4-206ENST00000478938 CCR10P46092 362 aa21.57■■□□□ 1.04
SDF4-206ENST00000478938 RFTN1Q14699 578 aaPredicted RBP21.57■■□□□ 1.04
SDF4-206ENST00000478938 LRRC49Q8IUZ0 686 aa21.57■■□□□ 1.04
SDF4-206ENST00000478938 DEPDC4Q8N2C3 294 aa21.57■■□□□ 1.04
SDF4-206ENST00000478938 CANT1Q8WVQ1 401 aa21.57■■□□□ 1.04
SDF4-206ENST00000478938 EMILIN2Q9BXX0 1053 aa21.57■■□□□ 1.04
SDF4-206ENST00000478938 GMPR2Q9P2T1 348 aaKnown RBP21.57■■□□□ 1.04
SDF4-206ENST00000478938 SLC9A2Q9UBY0 812 aa21.57■■□□□ 1.04
SDF4-206ENST00000478938 KCNU1A8MYU2 1149 aa21.56■■□□□ 1.04
SDF4-206ENST00000478938 PHGDHO43175 533 aaKnown RBP21.56■■□□□ 1.04
SDF4-206ENST00000478938 PAPSS1O43252 624 aaPredicted RBP21.56■■□□□ 1.04
SDF4-206ENST00000478938 IDH3BO43837 385 aa21.56■■□□□ 1.04
SDF4-206ENST00000478938 SYNCRIPO60506 623 aaKnown RBP21.56■■□□□ 1.04
SDF4-206ENST00000478938 CHRNGP07510 517 aa21.56■■□□□ 1.04
SDF4-206ENST00000478938 NCAM1P13591 858 aa21.56■■□□□ 1.04
SDF4-206ENST00000478938 LEPRP48357 1165 aaKnown RBP21.56■■□□□ 1.04
SDF4-206ENST00000478938 ECT2LQ008S8 904 aa21.56■■□□□ 1.04
SDF4-206ENST00000478938 ENOSF1Q7L5Y1 443 aa21.56■■□□□ 1.04
SDF4-206ENST00000478938 HAUS6Q7Z4H7 955 aa21.56■■□□□ 1.04
SDF4-206ENST00000478938 CAMK1DQ8IU85 385 aa21.56■■□□□ 1.04
SDF4-206ENST00000478938 EFHD1Q9BUP0 239 aa21.56■■□□□ 1.04
SDF4-206ENST00000478938 XPNPEP3Q9NQH7 507 aa21.56■■□□□ 1.04
SDF4-206ENST00000478938 SATB2Q9UPW6 733 aa21.56■■□□□ 1.04
SDF4-206ENST00000478938 PHLPP1O60346 1717 aa21.56■■□□□ 1.04
SDF4-206ENST00000478938 RNF103-CHMP3A0A140T963 221 aa21.56■■□□□ 1.04
SDF4-206ENST00000478938 PRORSD1PA6NEY8 169 aa21.56■■□□□ 1.04
SDF4-206ENST00000478938 TPST1O60507 370 aa21.56■■□□□ 1.04
SDF4-206ENST00000478938 BCAS1O75363 584 aaPredicted RBP21.56■■□□□ 1.04
SDF4-206ENST00000478938 UGT2B4P06133 528 aa21.56■■□□□ 1.04
SDF4-206ENST00000478938 YBX3P16989 372 aaKnown RBP eCLIP21.56■■□□□ 1.04
SDF4-206ENST00000478938 RACK1P63244 317 aaKnown RBP21.56■■□□□ 1.04
SDF4-206ENST00000478938 GPATCH4Q5T3I0 446 aaKnown RBP21.56■■□□□ 1.04
SDF4-206ENST00000478938 GK5Q6ZS86 529 aa21.56■■□□□ 1.04
SDF4-206ENST00000478938 TTLL6Q8N841 843 aa21.56■■□□□ 1.04
SDF4-206ENST00000478938 LXNQ9BS40 222 aa21.56■■□□□ 1.04
SDF4-206ENST00000478938 SHANK3Q9BYB0 1731 aa21.56■■□□□ 1.04
SDF4-206ENST00000478938 ROBO1Q9Y6N7 1651 aa21.56■■□□□ 1.04
SDF4-206ENST00000478938 COL5A2P05997 1499 aaPredicted RBP21.55■■□□□ 1.04
SDF4-206ENST00000478938 SNPHO15079 494 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 TADA2AO75478 443 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 NAT2P11245 290 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 BMP4P12644 408 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 KDELR1P24390 212 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 HLCSP50747 726 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 TUBA1BP68363 451 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 GSTO1P78417 241 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 TUBA1AQ71U36 451 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 LDHDQ86WU2 507 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 ZCCHC7Q8N3Z6 543 aaKnown RBP21.55■■□□□ 1.04
SDF4-206ENST00000478938 MFSD4AQ8N468 514 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 NAT16Q8N8M0 369 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 LRRN4Q8WUT4 740 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 PBXIP1Q96AQ6 731 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 SLC7A5P2Q9GIP4 190 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 ADAMTS10Q9H324 1103 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 ZNF385DQ9H6B1 395 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 ZBTB26Q9HCK0 441 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 PCDHB4Q9Y5E5 795 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 IGLV3-22A0A075B6J6 115 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 CDK2AP1O14519 115 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 ALX3O95076 343 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 MBL2P11226 248 aaPredicted RBP21.55■■□□□ 1.04
SDF4-206ENST00000478938 TFE3P19532 575 aaPredicted RBP21.55■■□□□ 1.04
SDF4-206ENST00000478938 MMP8P22894 467 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 KRT6CP48668 564 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 TAF5Q15542 800 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 GTF2IRD2BQ6EKJ0 949 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 KIAA0408Q6ZU52 694 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 ERMP1Q7Z2K6 904 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 GTF2IRD2Q86UP8 949 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 SLC51AQ86UW1 340 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 ARMC8Q8IUR7 673 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 ESX1Q8N693 406 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 SEPT8Q92599 483 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 FRMD8P1Q9BZ68 369 aaPredicted RBP21.55■■□□□ 1.04
SDF4-206ENST00000478938 CYP26B1Q9NR63 512 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 KCND2Q9NZV8 630 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 WARS2Q9UGM6 360 aaKnown RBP21.55■■□□□ 1.04
SDF4-206ENST00000478938 DCDC2Q9UHG0 476 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 ENPP5Q9UJA9 477 aa21.55■■□□□ 1.04
SDF4-206ENST00000478938 AP3B1O00203 1094 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 PSMD10O75832 226 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 DDHD2O94830 711 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 KRT3P12035 628 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 PROZP22891 400 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 TRIM32Q13049 653 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 XAF1Q6GPH4 301 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 SLCO6A1Q86UG4 719 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 TTC30BQ8N4P2 665 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 SNX31Q8N9S9 440 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 SLC39A3Q9BRY0 314 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.54■■□□□ 1.04
SDF4-206ENST00000478938 IGKV6D-41A0A0C4DH26 115 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 FAM172BPA6NC97 362 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 APOC4-APOC2K7ER74 178 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 APOC2P02655 101 aa21.54■■□□□ 1.04
SDF4-206ENST00000478938 JUNP05412 331 aaKnown RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms