RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 SNAP91O60641 907 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 OPHN1O60890 802 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 GLDCP23378 1020 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 HLA-FP30511 346 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 VSNL1P62760 191 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 BASP1P80723 227 aaKnown RBP13.59□□□□□ -0.23
LMNA-214ENST00000478063 NR1H3Q13133 447 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 SLC12A1Q13621 1099 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 RUNX3Q13761 415 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 TRADDQ15628 312 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 LEXMQ3ZCV2 418 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 TEX44Q53QW1 395 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 FAXCQ5TGI0 409 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 TMCO4Q5TGY1 634 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 MARC1Q5VT66 337 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 ITPRIPL1Q6GPH6 555 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 C4orf22Q6V702 233 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 PID1Q7Z2X4 250 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 APCDD1Q8J025 514 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 DCAF4L2Q8NA75 395 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 TTC8Q8TAM2 541 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 MAML1Q92585 1016 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 FATE1Q969F0 183 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 AGAP3Q96P47 875 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 C2orf49Q9BVC5 232 aaPredicted RBP13.59□□□□□ -0.23
LMNA-214ENST00000478063 PHF7Q9BWX1 381 aaPredicted RBP13.59□□□□□ -0.23
LMNA-214ENST00000478063 SLC2A11Q9BYW1 496 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 PDFQ9HBH1 243 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 DNAJC17Q9NVM6 304 aaKnown RBP13.59□□□□□ -0.23
LMNA-214ENST00000478063 GRHL1Q9NZI5 618 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 WHRNQ9P202 907 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 UBA2Q9UBT2 640 aaPredicted RBP13.59□□□□□ -0.23
LMNA-214ENST00000478063 RSPH14Q9UHP6 348 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 TRHDEQ9UKU6 1024 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 TTLL3Q9Y4R7 772 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 OR51B4Q9Y5P0 310 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 SZT2Q5T011 3432 aa13.59□□□□□ -0.23
LMNA-214ENST00000478063 ANHXE9PGG2 379 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 DNALI1O14645 258 aaPredicted RBP13.58□□□□□ -0.24
LMNA-214ENST00000478063 SEC31AO94979 1220 aaKnown RBP13.58□□□□□ -0.24
LMNA-214ENST00000478063 PEX11BO96011 259 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 HLA-DQB2P05538 268 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 TUBBP07437 444 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 PABPC1P11940 636 aaKnown RBP13.58□□□□□ -0.24
LMNA-214ENST00000478063 IVDP26440 423 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 PSMB4P28070 264 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 MMP13P45452 471 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 CARSP49589 748 aaKnown RBP13.58□□□□□ -0.24
LMNA-214ENST00000478063 DGKGP49619 791 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 RENBPP51606 427 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 DRG2P55039 364 aaKnown RBP13.58□□□□□ -0.24
LMNA-214ENST00000478063 SLC10A7Q0GE19 358 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 CUL1Q13616 776 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 HNRNPDQ14103 355 aaKnown RBP13.58□□□□□ -0.24
LMNA-214ENST00000478063 ZNF235Q14590 738 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 SMAD2Q15796 467 aaKnown RBP13.58□□□□□ -0.24
LMNA-214ENST00000478063 PLEKHG6Q3KR16 790 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 FUT11Q495W5 492 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 PITRM1Q5JRX3 1037 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 ASTLQ6HA08 431 aaPredicted RBP13.58□□□□□ -0.24
LMNA-214ENST00000478063 PTCRAQ6ISU1 281 aaPredicted RBP13.58□□□□□ -0.24
LMNA-214ENST00000478063 WDR93Q6P2C0 686 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 LINGO4Q6UY18 593 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 C12orf40Q86WS4 652 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 GSPT2Q8IYD1 628 aaKnown RBP13.58□□□□□ -0.24
LMNA-214ENST00000478063 PLCD3Q8N3E9 789 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 BBOF1Q8ND07 529 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 SEC14L1Q92503 715 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 ALG14Q96F25 216 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 TEKT5Q96M29 485 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 ZNF599Q96NL3 588 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 IL12RB2Q99665 862 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 BRD9Q9H8M2 597 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 NT5MQ9NPB1 228 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 RAB6BQ9NRW1 208 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 RBM22Q9NW64 420 aaKnown RBP eCLIP13.58□□□□□ -0.24
LMNA-214ENST00000478063 VPS51Q9UID3 782 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 ATG2BQ96BY7 2078 aa13.58□□□□□ -0.24
LMNA-214ENST00000478063 MUC22E2RYF6 1773 aaPredicted RBP13.58□□□□□ -0.24
LMNA-214ENST00000478063 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.57□□□□□ -0.24
LMNA-214ENST00000478063 OTOL1A6NHN0 477 aaPredicted RBP13.57□□□□□ -0.24
LMNA-214ENST00000478063 NDC80O14777 642 aa13.57□□□□□ -0.24
LMNA-214ENST00000478063 ZBTB24O43167 697 aaPredicted RBP13.57□□□□□ -0.24
LMNA-214ENST00000478063 ZMPSTE24O75844 475 aa13.57□□□□□ -0.24
LMNA-214ENST00000478063 METTL18O95568 372 aa13.57□□□□□ -0.24
LMNA-214ENST00000478063 ITIH2P19823 946 aa13.57□□□□□ -0.24
LMNA-214ENST00000478063 NFKB1P19838 968 aa13.57□□□□□ -0.24
LMNA-214ENST00000478063 TNFRSF8P28908 595 aa13.57□□□□□ -0.24
LMNA-214ENST00000478063 FDFT1P37268 417 aa13.57□□□□□ -0.24
LMNA-214ENST00000478063 PLK1P53350 603 aa13.57□□□□□ -0.24
LMNA-214ENST00000478063 ITGA8P53708 1063 aa13.57□□□□□ -0.24
LMNA-214ENST00000478063 ARF5P84085 180 aa13.57□□□□□ -0.24
LMNA-214ENST00000478063 ITKQ08881 620 aa13.57□□□□□ -0.24
LMNA-214ENST00000478063 DMC1Q14565 340 aa13.57□□□□□ -0.24
LMNA-214ENST00000478063 LBRQ14739 615 aaKnown RBP13.57□□□□□ -0.24
LMNA-214ENST00000478063 GAB4Q2WGN9 574 aa13.57□□□□□ -0.24
LMNA-214ENST00000478063 PCGF5Q86SE9 256 aa13.57□□□□□ -0.24
LMNA-214ENST00000478063 BBS5Q8N3I7 341 aa13.57□□□□□ -0.24
LMNA-214ENST00000478063 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.57□□□□□ -0.24
LMNA-214ENST00000478063 ACDQ96AP0 544 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms