RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 DDX58O95786 925 aaKnown RBP5.25□□□□□ -1.57
VPS50-214ENST00000477935 TIMP1P01033 207 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 PBX1P40424 430 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 SSBP2P81877 361 aaPredicted RBP5.25□□□□□ -1.57
VPS50-214ENST00000477935 DNASE1L3Q13609 305 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 KCNB1Q14721 858 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 AASDHQ4L235 1098 aaPredicted RBP5.25□□□□□ -1.57
VPS50-214ENST00000477935 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.25□□□□□ -1.57
VPS50-214ENST00000477935 EPHA10Q5JZY3 1008 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 ZNF626Q68DY1 528 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 MIS18BP1Q6P0N0 1132 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 VSTM1Q6UX27 236 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 KRT73Q86Y46 540 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 ZNF398Q8TD17 642 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 PRR11Q96HE9 360 aaPredicted RBP5.25□□□□□ -1.57
VPS50-214ENST00000477935 CCDC138Q96M89 665 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 MYD88Q99836 296 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 CINPQ9BW66 212 aaPredicted RBP5.25□□□□□ -1.57
VPS50-214ENST00000477935 KLHL13Q9P2N7 655 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 TNFRSF18Q9Y5U5 241 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 ECM29Q5VYK3 1845 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 ZNF521Q96K83 1311 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 CHD9Q3L8U1 2897 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 ANKRD18BA2A2Z9 1011 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 FAM234BA2RU67 622 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 TAF5LO75529 589 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 HOXC6P09630 235 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 PECAM1P16284 738 aaPredicted RBP5.24□□□□□ -1.57
VPS50-214ENST00000477935 SFPQP23246 707 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS50-214ENST00000477935 EEF1GP26641 437 aaKnown RBP5.24□□□□□ -1.57
VPS50-214ENST00000477935 HOXA7P31268 230 aaPredicted RBP5.24□□□□□ -1.57
VPS50-214ENST00000477935 ARHGAP25P42331 645 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 CCDC15Q0P6D6 951 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 LMOD3Q0VAK6 560 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 UBE4AQ14139 1066 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 KCNJ12Q14500 433 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 CCL14Q16627 93 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 SLC5A9Q2M3M2 681 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 IZUMO3Q5VZ72 239 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 RANBP10Q6VN20 620 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 ZNF813Q6ZN06 617 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 ANKRD33Q7Z3H0 272 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 TMEM199Q8N511 208 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 GRAMD1AQ96CP6 724 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 TNIP3Q96KP6 325 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 UPF3BQ9BZI7 483 aaKnown RBP5.24□□□□□ -1.57
VPS50-214ENST00000477935 CERS4Q9HA82 394 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 SAP30LQ9HAJ7 183 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 RGL1Q9NZL6 768 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 FNIP2Q9P278 1114 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 FZD4Q9ULV1 537 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 MTCH2Q9Y6C9 303 aa5.24□□□□□ -1.57
VPS50-214ENST00000477935 CACNA1HO95180 2353 aa5.23□□□□□ -1.57
VPS50-214ENST00000477935 CYP2D7A0A087X1C5 515 aa5.23□□□□□ -1.57
VPS50-214ENST00000477935 OR2W5A6NFC9 320 aa5.23□□□□□ -1.57
VPS50-214ENST00000477935 CHL1O00533 1208 aa5.23□□□□□ -1.57
VPS50-214ENST00000477935 ZSCAN9O15535 394 aaPredicted RBP5.23□□□□□ -1.57
VPS50-214ENST00000477935 SEPT4O43236 478 aa5.23□□□□□ -1.57
VPS50-214ENST00000477935 MBPP02686 304 aaPredicted RBP5.23□□□□□ -1.57
VPS50-214ENST00000477935 TMIGD3P0DMS9 266 aaPredicted RBP5.23□□□□□ -1.57
VPS50-214ENST00000477935 GALNSP34059 522 aa5.23□□□□□ -1.57
VPS50-214ENST00000477935 DGKQP52824 942 aa5.23□□□□□ -1.57
VPS50-214ENST00000477935 CCNA1P78396 465 aa5.23□□□□□ -1.57
VPS50-214ENST00000477935 IRX3P78415 501 aaPredicted RBP5.23□□□□□ -1.57
VPS50-214ENST00000477935 NEXNQ0ZGT2 675 aa5.23□□□□□ -1.57
VPS50-214ENST00000477935 ATP1A4Q13733 1029 aa5.23□□□□□ -1.57
VPS50-214ENST00000477935 ZNF268Q14587 947 aaPredicted RBP5.23□□□□□ -1.57
VPS50-214ENST00000477935 MAP9Q49MG5 647 aa5.23□□□□□ -1.57
VPS50-214ENST00000477935 MORN5Q5VZ52 161 aa5.23□□□□□ -1.57
VPS50-214ENST00000477935 GPR142Q7Z601 462 aa5.23□□□□□ -1.57
VPS50-214ENST00000477935 CNGA4Q8IV77 575 aa5.23□□□□□ -1.57
VPS50-214ENST00000477935 KIAA1191Q96A73 305 aa5.23□□□□□ -1.57
VPS50-214ENST00000477935 HIC2Q96JB3 615 aa5.23□□□□□ -1.57
VPS50-214ENST00000477935 FAM84BQ96KN1 310 aaPredicted RBP5.23□□□□□ -1.57
VPS50-214ENST00000477935 FAM118BQ9BPY3 351 aa5.23□□□□□ -1.57
VPS50-214ENST00000477935 SLC29A3Q9BZD2 475 aa5.23□□□□□ -1.57
VPS50-214ENST00000477935 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.23□□□□□ -1.57
VPS50-214ENST00000477935 TMEM8AQ9HCN3 771 aa5.23□□□□□ -1.57
VPS50-214ENST00000477935 GAKO14976 1311 aa5.23□□□□□ -1.57
VPS50-214ENST00000477935 MAPK8IP3Q9UPT6 1336 aa5.23□□□□□ -1.57
VPS50-214ENST00000477935 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.22□□□□□ -1.57
VPS50-214ENST00000477935 SLC15A5A6NIM6 579 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 PROB1E7EW31 1015 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 INO80B-WBP1J3KQ70 363 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 SNAP23O00161 211 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 ENTPD3O75355 529 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 FRAT2O75474 233 aaPredicted RBP5.22□□□□□ -1.57
VPS50-214ENST00000477935 RNF8O76064 485 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 VIPP01282 170 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 FGBP02675 491 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 DRD1P21728 446 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 ZNF81P51508 661 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 TCP10Q12799 353 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 SPP2Q13103 211 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 SLC14A1Q13336 389 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 DAZAP2Q15038 168 aaPredicted RBP5.22□□□□□ -1.57
VPS50-214ENST00000477935 SEC23BQ15437 767 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 LEXMQ3ZCV2 418 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 ARHGAP15Q53QZ3 475 aa5.22□□□□□ -1.57
VPS50-214ENST00000477935 TMEM196Q5HYL7 178 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms