RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 GZMAP12544 262 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 PSMA2P25787 234 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 DRD3P35462 400 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 NRG1Q02297 640 aaPredicted RBP18.06■□□□□ 0.48
PTPN7-209ENST00000477554 SCAPQ12770 1279 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 SEMA3BQ13214 749 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 SETD3Q86TU7 594 aaPredicted RBP18.06■□□□□ 0.48
PTPN7-209ENST00000477554 NETO1Q8TDF5 533 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 NTAN1Q96AB6 310 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 THAP2Q9H0W7 228 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 EBF2Q9HAK2 575 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 PARVAQ9NVD7 372 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 EIF2B4Q9UI10 523 aaKnown RBP18.06■□□□□ 0.48
PTPN7-209ENST00000477554 NENFQ9UMX5 172 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 CACNA1AO00555 2505 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 TARSL2A2RTX5 802 aaKnown RBP18.06■□□□□ 0.48
PTPN7-209ENST00000477554 METTL12A8MUP2 240 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 PRR5-ARHGAP8B1AHC4 643 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 CBX4O00257 560 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 SLC30A4O14863 429 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 TM4SF5O14894 197 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 KHNYNO15037 678 aaKnown RBP18.06■□□□□ 0.48
PTPN7-209ENST00000477554 CREB3O43889 395 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 DNTTP04053 509 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 SLC8A1P32418 973 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 MAPK8P45983 427 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 KRT83P78385 493 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 ARHGAP8P85298 464 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 BNC1Q01954 994 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 GNA12Q03113 381 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 GFPT1Q06210 699 aaPredicted RBP18.06■□□□□ 0.48
PTPN7-209ENST00000477554 MTA1Q13330 715 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 SPDYCQ5MJ68 293 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 TXNRD3NBQ6F5E7 133 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 ALKBH5Q6P6C2 394 aaKnown RBP18.06■□□□□ 0.48
PTPN7-209ENST00000477554 RGL4Q8IZJ4 473 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 ZCCHC9Q8N567 271 aaKnown RBP18.06■□□□□ 0.48
PTPN7-209ENST00000477554 C1orf216Q8TAB5 229 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 VOPP1Q96AW1 172 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 VCPIP1Q96JH7 1222 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 ORAI3Q9BRQ5 295 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 PACSIN1Q9BY11 444 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 MIR1-1HGQ9H1L0 117 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 CAPN10Q9HC96 672 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 SPTLC3Q9NUV7 552 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 FBXL12Q9NXK8 326 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 SLC25A13Q9UJS0 675 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 HS3ST2Q9Y278 367 aa18.06■□□□□ 0.48
PTPN7-209ENST00000477554 ILVBLA1L0T0 632 aa18.05■□□□□ 0.48
PTPN7-209ENST00000477554 FAM47DPA6NHR8 397 aa18.05■□□□□ 0.48
PTPN7-209ENST00000477554 RNASEH2AO75792 299 aaKnown RBP18.05■□□□□ 0.48
PTPN7-209ENST00000477554 SEMA4FO95754 770 aa18.05■□□□□ 0.48
PTPN7-209ENST00000477554 IL1BP01584 269 aa18.05■□□□□ 0.48
PTPN7-209ENST00000477554 RHOQP17081 205 aa18.05■□□□□ 0.48
PTPN7-209ENST00000477554 ENGP17813 658 aa18.05■□□□□ 0.48
PTPN7-209ENST00000477554 IL1R2P27930 398 aa18.05■□□□□ 0.48
PTPN7-209ENST00000477554 SULT2A1Q06520 285 aa18.05■□□□□ 0.48
PTPN7-209ENST00000477554 PUM1Q14671 1186 aaKnown RBP eCLIP18.05■□□□□ 0.485e-6■□□□□ 10.2
PTPN7-209ENST00000477554 ARL13BQ3SXY8 428 aa18.05■□□□□ 0.48
PTPN7-209ENST00000477554 CCDC122Q5T0U0 273 aa18.05■□□□□ 0.48
PTPN7-209ENST00000477554 C6orf118Q5T5N4 469 aa18.05■□□□□ 0.48
PTPN7-209ENST00000477554 SLC23A3Q6PIS1 610 aa18.05■□□□□ 0.48
PTPN7-209ENST00000477554 TXLNBQ8N3L3 684 aa18.05■□□□□ 0.48
PTPN7-209ENST00000477554 DCAF4L2Q8NA75 395 aa18.05■□□□□ 0.48
PTPN7-209ENST00000477554 ATP11CQ8NB49 1132 aa18.05■□□□□ 0.48
PTPN7-209ENST00000477554 OR2A12Q8NGT7 310 aa18.05■□□□□ 0.48
PTPN7-209ENST00000477554 GANCQ8TET4 914 aa18.05■□□□□ 0.48
PTPN7-209ENST00000477554 SNX19Q92543 992 aa18.05■□□□□ 0.48
PTPN7-209ENST00000477554 TBC1D31Q96DN5 1066 aa18.05■□□□□ 0.48
PTPN7-209ENST00000477554 KCTD15Q96SI1 283 aaPredicted RBP18.05■□□□□ 0.48
PTPN7-209ENST00000477554 ACE2Q9BYF1 805 aaPredicted RBP18.05■□□□□ 0.48
PTPN7-209ENST00000477554 ATP13A1Q9HD20 1204 aa18.05■□□□□ 0.48
PTPN7-209ENST00000477554 TMEM248Q9NWD8 314 aa18.05■□□□□ 0.48
PTPN7-209ENST00000477554 FCF1Q9Y324 198 aaKnown RBP18.05■□□□□ 0.48
PTPN7-209ENST00000477554 MEI4A8MW99 385 aa18.04■□□□□ 0.48
PTPN7-209ENST00000477554 WNT9AO14904 365 aa18.04■□□□□ 0.48
PTPN7-209ENST00000477554 IGHV4-34P06331 123 aa18.04■□□□□ 0.48
PTPN7-209ENST00000477554 MIPP30301 263 aa18.04■□□□□ 0.48
PTPN7-209ENST00000477554 GKP32189 559 aa18.04■□□□□ 0.48
PTPN7-209ENST00000477554 E2F5Q15329 346 aa18.04■□□□□ 0.48
PTPN7-209ENST00000477554 NCEH1Q6PIU2 408 aa18.04■□□□□ 0.48
PTPN7-209ENST00000477554 DGLUCYQ7Z3D6 616 aa18.04■□□□□ 0.48
PTPN7-209ENST00000477554 TP53INP2Q8IXH6 220 aa18.04■□□□□ 0.48
PTPN7-209ENST00000477554 HDDC3Q8N4P3 179 aa18.04■□□□□ 0.48
PTPN7-209ENST00000477554 DNASE2BQ8WZ79 361 aa18.04■□□□□ 0.48
PTPN7-209ENST00000477554 ARHGEF2Q92974 986 aaKnown RBP18.04■□□□□ 0.48
PTPN7-209ENST00000477554 BIRC7Q96CA5 298 aa18.04■□□□□ 0.48
PTPN7-209ENST00000477554 SNRNP25Q9BV90 132 aaKnown RBP18.04■□□□□ 0.48
PTPN7-209ENST00000477554 EVLQ9UI08 416 aaPredicted RBP18.04■□□□□ 0.48
PTPN7-209ENST00000477554 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.04■□□□□ 0.48
PTPN7-209ENST00000477554 MFHAS1Q9Y4C4 1052 aa18.04■□□□□ 0.48
PTPN7-209ENST00000477554 ASCC3Q8N3C0 2202 aaKnown RBP18.03■□□□□ 0.48
PTPN7-209ENST00000477554 C10orf142B7Z368 130 aa18.03■□□□□ 0.48
PTPN7-209ENST00000477554 LRCH4O75427 683 aa18.03■□□□□ 0.48
PTPN7-209ENST00000477554 FSBPO95073 299 aa18.03■□□□□ 0.48
PTPN7-209ENST00000477554 EPHB2P29323 1055 aa18.03■□□□□ 0.48
PTPN7-209ENST00000477554 OXTRP30559 389 aa18.03■□□□□ 0.48
PTPN7-209ENST00000477554 L1CAMP32004 1257 aa18.03■□□□□ 0.48
PTPN7-209ENST00000477554 VASPP50552 380 aaPredicted RBP18.03■□□□□ 0.48
PTPN7-209ENST00000477554 GALCP54803 685 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms