RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 RAP2CQ9Y3L5 183 aa13.66□□□□□ -0.22
DFFB-209ENST00000477548 C1orf232A0A0U1RR37 186 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.65□□□□□ -0.22
DFFB-209ENST00000477548 G3V2L1 256 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 ATG7O95352 703 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 PDGFRAP16234 1089 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 GPD1P21695 349 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 MGAT1P26572 445 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 DCKP27707 260 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 MAP4P27816 1152 aaKnown RBP13.65□□□□□ -0.22
DFFB-209ENST00000477548 ADSLP30566 484 aaPredicted RBP13.65□□□□□ -0.22
DFFB-209ENST00000477548 SLC7A1P30825 629 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 GP5P40197 560 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 CCR10P46092 362 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 ZNF143P52747 638 aaPredicted RBP13.65□□□□□ -0.22
DFFB-209ENST00000477548 RALGDSQ12967 914 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 NME3Q13232 169 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 IRF5Q13568 498 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 MTERF2Q49AM1 385 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 ILDR2Q71H61 639 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 CPXCR1Q8N123 301 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 PCDH19Q8TAB3 1148 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 ATP6V0A1Q93050 837 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 TMEM143Q96AN5 459 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 SLCO4A1Q96BD0 722 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 CNPY3Q9BT09 278 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 LHX5Q9H2C1 402 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 ZNF70Q9UC06 446 aaPredicted RBP13.65□□□□□ -0.22
DFFB-209ENST00000477548 ERGIC3Q9Y282 383 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 CORINQ9Y5Q5 1042 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 TCAF2A6NFQ2 919 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 UNCXA6NJT0 531 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 TRIM64CA6NLI5 447 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 E7ENX8 843 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 KDM1AO60341 852 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 PIGNO95427 931 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 ZNF182P17025 639 aaPredicted RBP13.65□□□□□ -0.22
DFFB-209ENST00000477548 PDK2Q15119 407 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 ZNF699Q32M78 642 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 THOC7Q6I9Y2 204 aaKnown RBP13.65□□□□□ -0.22
DFFB-209ENST00000477548 SNRNP48Q6IEG0 339 aaKnown RBP13.65□□□□□ -0.22
DFFB-209ENST00000477548 HMBOX1Q6NT76 420 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 SWSAP1Q6NVH7 229 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 CES3Q6UWW8 571 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 FAM160B2Q86V87 743 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 RXFP2Q8WXD0 754 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 TAMM41Q96BW9 452 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 TAAR1Q96RJ0 339 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 SMOXQ9NWM0 555 aa13.65□□□□□ -0.22
DFFB-209ENST00000477548 COPG1Q9Y678 874 aaKnown RBP13.65□□□□□ -0.22
DFFB-209ENST00000477548 CNTNAP1P78357 1384 aa13.65□□□□□ -0.23
DFFB-209ENST00000477548 HEATR9A2RTY3 570 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 KCNU1A8MYU2 1149 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 H2AFYO75367 372 aaKnown RBP13.64□□□□□ -0.23
DFFB-209ENST00000477548 GRAP2O75791 330 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 TFEBP19484 476 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 TFE3P19532 575 aaPredicted RBP13.64□□□□□ -0.23
DFFB-209ENST00000477548 JAK1P23458 1154 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 TGFB2P61812 414 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 PRKCQQ04759 706 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 NAB1Q13506 487 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 PPP4R4Q6NUP7 873 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 GALNT18Q6P9A2 607 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 GK5Q6ZS86 529 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 CYP4V2Q6ZWL3 525 aaPredicted RBP13.64□□□□□ -0.23
DFFB-209ENST00000477548 DPH6Q7L8W6 267 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 TMCO5AQ8N6Q1 288 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 ADAMTS16Q8TE57 1224 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 TRUB1Q8WWH5 349 aaKnown RBP13.64□□□□□ -0.23
DFFB-209ENST00000477548 APBA2Q99767 749 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 ZNF341Q9BYN7 854 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 A0A096LPK6 155 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 ZNF839A8K0R7 811 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 GCATO75600 419 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 PGAM1P18669 254 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 IL4RP24394 825 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 RAP1GAPP47736 663 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 NME5P56597 212 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 FKBP1AP62942 108 aaKnown RBP13.64□□□□□ -0.23
DFFB-209ENST00000477548 IRF9Q00978 393 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 DMPKQ09013 629 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 NEDD8Q15843 81 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 ARL13AQ5H913 290 aaPredicted RBP13.64□□□□□ -0.23
DFFB-209ENST00000477548 LRRC8EQ6NSJ5 796 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 EEPD1Q7L9B9 569 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 ZNF354CQ86Y25 554 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 DOK1Q99704 481 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 NMRAL1Q9HBL8 299 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 NGRNQ9NPE2 291 aaKnown RBP13.64□□□□□ -0.23
DFFB-209ENST00000477548 MTMR10Q9NXD2 777 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 NCKIPSDQ9NZQ3 722 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 RBMX2Q9Y388 322 aaKnown RBP13.64□□□□□ -0.23
DFFB-209ENST00000477548 PCDHGA7Q9Y5G6 932 aa13.64□□□□□ -0.23
DFFB-209ENST00000477548 GRID2O43424 1007 aa13.63□□□□□ -0.23
DFFB-209ENST00000477548 SNAP91O60641 907 aa13.63□□□□□ -0.23
DFFB-209ENST00000477548 F7P08709 466 aaPredicted RBP13.63□□□□□ -0.23
DFFB-209ENST00000477548 TNFSF9P41273 254 aa13.63□□□□□ -0.23
DFFB-209ENST00000477548 TFAMQ00059 246 aaKnown RBP13.63□□□□□ -0.23
DFFB-209ENST00000477548 KCNC4Q03721 635 aa13.63□□□□□ -0.23
DFFB-209ENST00000477548 GLRA4Q5JXX5 417 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms