RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 ASPHD1Q5U4P2 390 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 NAPEPLDQ6IQ20 393 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 RETSATQ6NUM9 610 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 WDR5BQ86VZ2 330 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 TMTC1Q8IUR5 882 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 FAM185AQ8N0U4 392 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 ESX1Q8N693 406 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 LSM14AQ8ND56 463 aaKnown RBP3.6□□□□□ -1.83
TARDBP-208ENST00000477447 SETD9Q8NE22 299 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 TEFMQ96QE5 360 aaKnown RBP3.6□□□□□ -1.83
TARDBP-208ENST00000477447 EIF2AK1Q9BQI3 630 aaKnown RBP3.6□□□□□ -1.83
TARDBP-208ENST00000477447 C1QTNF7Q9BXJ2 289 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 TAOK3Q9H2K8 898 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 FOXP1Q9H334 677 aaPredicted RBP3.6□□□□□ -1.83
TARDBP-208ENST00000477447 CXorf56Q9H5V9 222 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 PNRC2Q9NPJ4 139 aaKnown RBP3.6□□□□□ -1.83
TARDBP-208ENST00000477447 SEMA4BQ9NPR2 832 aaPredicted RBP3.6□□□□□ -1.83
TARDBP-208ENST00000477447 DECR2Q9NUI1 292 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 IFT80Q9P2H3 777 aaPredicted RBP3.6□□□□□ -1.83
TARDBP-208ENST00000477447 CDH22Q9UJ99 828 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 ANAPC4Q9UJX5 808 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 GJD2Q9UKL4 321 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 CRYL1Q9Y2S2 319 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 HS3ST3B1Q9Y662 390 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 COL3A1P02461 1466 aaPredicted RBP3.6□□□□□ -1.83
TARDBP-208ENST00000477447 PCSK5Q92824 1860 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 TRBV5-7A0A0A0MS05 114 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 TMEM272A0A1B0GTI8 110 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.59□□□□□ -1.83
TARDBP-208ENST00000477447 TARSL2A2RTX5 802 aaKnown RBP3.59□□□□□ -1.83
TARDBP-208ENST00000477447 FAM90A7PA6NKC0 464 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 FAM90A22PA8MWA6 464 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 FAM90A12PA8MX19 464 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 FAM90A23PA8MXZ1 464 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 EYA2O00167 538 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 PER2O15055 1255 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 HOXC11O43248 304 aaPredicted RBP3.59□□□□□ -1.83
TARDBP-208ENST00000477447 MOSPD3O75425 235 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 IFIT1P09914 478 aaKnown RBP3.59□□□□□ -1.83
TARDBP-208ENST00000477447 XBP1P17861 261 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 PSMC2P35998 433 aaKnown RBP3.59□□□□□ -1.83
TARDBP-208ENST00000477447 ALDH7A1P49419 539 aaKnown RBP3.59□□□□□ -1.83
TARDBP-208ENST00000477447 CLCNKBP51801 687 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 VAMP2P63027 116 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 MAPK7Q13164 816 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 NFIL3Q16649 462 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 SYTL3Q4VX76 610 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 TMEM268Q5VZI3 342 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 NUGGCQ68CJ6 796 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 SLC22A25Q6T423 547 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 LRRC8DQ7L1W4 858 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 TRAPPC11Q7Z392 1133 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 C1QL2Q7Z5L3 287 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 ADGRG6Q86SQ4 1221 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 HEATR4Q86WZ0 1026 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 GPSM1Q86YR5 675 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 MMP21Q8N119 569 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 TMEM199Q8N511 208 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 DNAAF1Q8NEP3 725 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 RFWD2Q8NHY2 731 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 MPLKIPQ8TAP9 179 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 RAB40AQ8WXH6 277 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 SMG7Q92540 1137 aaKnown RBP3.59□□□□□ -1.83
TARDBP-208ENST00000477447 CNOT9Q92600 299 aaKnown RBP3.59□□□□□ -1.83
TARDBP-208ENST00000477447 HTRA1Q92743 480 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 SH3KBP1Q96B97 665 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 MSI2Q96DH6 328 aaKnown RBP3.59□□□□□ -1.83
TARDBP-208ENST00000477447 NLRP4Q96MN2 994 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 CD180Q99467 661 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 EYA3Q99504 573 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.59□□□□□ -1.83
TARDBP-208ENST00000477447 PHF7Q9BWX1 381 aaPredicted RBP3.59□□□□□ -1.83
TARDBP-208ENST00000477447 LMAN2LQ9H0V9 348 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 EPHX3Q9H6B9 360 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 WASH6PQ9NQA3 447 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 RNF146Q9NTX7 359 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 ZDHHC7Q9NXF8 308 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 PDP2Q9P2J9 529 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 PLEKHB1Q9UF11 243 aaPredicted RBP3.59□□□□□ -1.83
TARDBP-208ENST00000477447 PCDHA12Q9UN75 941 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 OSGIN2Q9Y236 505 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 RAP2CQ9Y3L5 183 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 ZNF521Q96K83 1311 aa3.59□□□□□ -1.83
TARDBP-208ENST00000477447 LY6G6EA0A0G2JKS1 128 aa3.58□□□□□ -1.84
TARDBP-208ENST00000477447 DDTLA6NHG4 134 aaPredicted RBP3.58□□□□□ -1.84
TARDBP-208ENST00000477447 ATG13O75143 517 aa3.58□□□□□ -1.84
TARDBP-208ENST00000477447 SYF2O95926 243 aaKnown RBP3.58□□□□□ -1.84
TARDBP-208ENST00000477447 ADAP00813 363 aa3.58□□□□□ -1.84
TARDBP-208ENST00000477447 IL1AP01583 271 aa3.58□□□□□ -1.84
TARDBP-208ENST00000477447 CHRM4P08173 479 aa3.58□□□□□ -1.84
TARDBP-208ENST00000477447 TMEM191BP0C7N4 346 aa3.58□□□□□ -1.84
TARDBP-208ENST00000477447 UNGP13051 313 aaPredicted RBP3.58□□□□□ -1.84
TARDBP-208ENST00000477447 PTGER1P34995 402 aa3.58□□□□□ -1.84
TARDBP-208ENST00000477447 LIFRP42702 1097 aa3.58□□□□□ -1.84
TARDBP-208ENST00000477447 GALNT2Q10471 571 aa3.58□□□□□ -1.84
TARDBP-208ENST00000477447 SLC18A3Q16572 532 aa3.58□□□□□ -1.84
TARDBP-208ENST00000477447 ME3Q16798 604 aa3.58□□□□□ -1.84
TARDBP-208ENST00000477447 PRTGQ2VWP7 1150 aa3.58□□□□□ -1.84
TARDBP-208ENST00000477447 FBXO43Q4G163 708 aa3.58□□□□□ -1.84
TARDBP-208ENST00000477447 MANEAQ5SRI9 462 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms