RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 CLDN2P57739 230 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 STAT4Q14765 748 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 INAVAQ3KP66 663 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 PIP5KL1Q5T9C9 394 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 FAM46CQ5VWP2 391 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 KDM7AQ6ZMT4 941 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 KANSL1Q7Z3B3 1105 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 DSG4Q86SJ6 1040 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 FAM131BQ86XD5 332 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 XYLT1Q86Y38 959 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 GALNT15Q8N3T1 639 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 EMC1Q8N766 993 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 MFSD2AQ8NA29 543 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 MLKLQ8NB16 471 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 ZNF397Q8NF99 534 aaPredicted RBP11.95□□□□□ -0.5
VARS2-208ENST00000477052 OR2A12Q8NGT7 310 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 SLC20A1Q8WUM9 679 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 FAM131CQ96AQ9 280 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 FAM81BQ96LP2 452 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 CFAP57Q96MR6 1250 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 DCBLD2Q96PD2 775 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 SPON2Q9BUD6 331 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 CLSTN2Q9H4D0 955 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 UCKL1Q9NWZ5 548 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 ARHGEF38Q9NXL2 777 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 URB1O60287 2271 aaKnown RBP11.94□□□□□ -0.5
VARS2-208ENST00000477052 E9PAM4 449 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 C1QTNF3-AMACRE9PGA6 284 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 TRIM38O00635 465 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 RFPL3O75679 317 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 ARRB1P49407 418 aaPredicted RBP11.94□□□□□ -0.5
VARS2-208ENST00000477052 DNA2P51530 1060 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 OXCT1P55809 520 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 ATP11AP98196 1134 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 TARDBPQ13148 414 aaKnown RBP eCLIP11.94□□□□□ -0.5
VARS2-208ENST00000477052 C5orf22Q49AR2 442 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 SLC45A4Q5BKX6 768 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 ZNF542PQ5EBM4 170 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 ARSIQ5FYB1 569 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 HES3Q5TGS1 186 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 KLHDC7AQ5VTJ3 777 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 NAA35Q5VZE5 725 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 SEL1L3Q68CR1 1132 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 LEKR1Q6ZMV7 388 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 ERICH1Q86X53 443 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 DRC7Q8IY82 874 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 TMEM35BQ8NCS4 154 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 C18orf8Q96DM3 657 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 TAB2Q9NYJ8 693 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 ZFR2Q9UPR6 939 aaKnown RBP11.94□□□□□ -0.5
VARS2-208ENST00000477052 HS3ST2Q9Y278 367 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 BAHCC1Q9P281 2608 aa11.94□□□□□ -0.5
VARS2-208ENST00000477052 ARID1BQ8NFD5 2236 aaPredicted RBP11.93□□□□□ -0.5
VARS2-208ENST00000477052 DRGXA6NNA5 263 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 FFAR2O15552 330 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 SLC7A4O43246 635 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 SIGLEC6O43699 453 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 PCDH8O95206 1070 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 THEGLP0DJG4 465 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 ITPKBP27987 946 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 OR1E1P30953 314 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 GKP32189 559 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 GABRB2P47870 512 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 VASPP50552 380 aaPredicted RBP11.93□□□□□ -0.5
VARS2-208ENST00000477052 KRT83P78385 493 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 SEMG2Q02383 582 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 CDO1Q16878 200 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 ZNF284Q2VY69 593 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 SLC25A52Q3SY17 297 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 SOWAHCQ53LP3 525 aaPredicted RBP11.93□□□□□ -0.5
VARS2-208ENST00000477052 BRMS1LQ5PSV4 323 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 SFMBT2Q5VUG0 894 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 C22orf39Q6P5X5 142 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 DPY19L3Q6ZPD9 716 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 TMPRSS12Q86WS5 348 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 TRIM69Q86WT6 500 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 SLC25A45Q8N413 288 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 PDCD7Q8N8D1 485 aaKnown RBP11.93□□□□□ -0.5
VARS2-208ENST00000477052 NETO2Q8NC67 525 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 OR13H1Q8NG92 308 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 OR6K2Q8NGY2 324 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 TSC1Q92574 1164 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 NT5C3BQ969T7 300 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 KLHDC7BQ96G42 594 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 BBC3Q96PG8 261 aaPredicted RBP11.93□□□□□ -0.5
VARS2-208ENST00000477052 C2orf49Q9BVC5 232 aaPredicted RBP11.93□□□□□ -0.5
VARS2-208ENST00000477052 NAA15Q9BXJ9 866 aaKnown RBP11.93□□□□□ -0.5
VARS2-208ENST00000477052 CALN1Q9BXU9 219 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 METTL5Q9NRN9 209 aaKnown RBP11.93□□□□□ -0.5
VARS2-208ENST00000477052 STAP1Q9ULZ2 295 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 FCF1Q9Y324 198 aaKnown RBP11.93□□□□□ -0.5
VARS2-208ENST00000477052 LOC400499M0QZD8 3231 aa11.93□□□□□ -0.5
VARS2-208ENST00000477052 COL5A1P20908 1838 aaPredicted RBP11.93□□□□□ -0.5
VARS2-208ENST00000477052 IGSF10Q6WRI0 2623 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 MYLKQ15746 1914 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 TDRD6O60522 2096 aaKnown RBP11.92□□□□□ -0.5
VARS2-208ENST00000477052 PRAMEF26H0Y7S4 382 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 ALOX15BO15296 676 aa11.92□□□□□ -0.5
VARS2-208ENST00000477052 ZNF821O75541 412 aaPredicted RBP11.92□□□□□ -0.5
VARS2-208ENST00000477052 LEFTY1O75610 366 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms