RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 FAM117AQ9C073 453 aa16.88■□□□□ 0.29
APOBEC3F-203ENST00000476513 CFAP45Q9UL16 551 aa16.88■□□□□ 0.29
APOBEC3F-203ENST00000476513 OR51B4Q9Y5P0 310 aa16.88■□□□□ 0.29
APOBEC3F-203ENST00000476513 TDRD6O60522 2096 aaKnown RBP16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 A6NNZ2 444 aa16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 KCNU1A8MYU2 1149 aa16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 KPNA3O00505 521 aaPredicted RBP16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 TRUB2O95900 331 aaKnown RBP16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 IGLV3-25P01717 112 aa16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 PITX1P78337 314 aaPredicted RBP16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 FZD2Q14332 565 aa16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 RABGAP1LQ5R372 815 aa16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 SEL1L3Q68CR1 1132 aa16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 FOXR1Q6PIV2 292 aa16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 CRTC1Q6UUV9 634 aa16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 PTAR1Q7Z6K3 402 aaPredicted RBP16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 CLEC14AQ86T13 490 aa16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 DCP2Q8IU60 420 aaKnown RBP16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 LURAP1LQ8IV03 231 aa16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 SMYD4Q8IYR2 804 aaPredicted RBP16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 BMFQ96LC9 184 aa16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 CCNL2Q96S94 520 aaPredicted RBP16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 PPP1R9BQ96SB3 815 aa16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 ST7Q9NRC1 585 aa16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 GPR27Q9NS67 375 aa16.87■□□□□ 0.29
APOBEC3F-203ENST00000476513 COL27A1Q8IZC6 1860 aaPredicted RBP16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 EME2A4GXA9 379 aaPredicted RBP16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 RNF103O00237 685 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 TERTO14746 1132 aaKnown RBP16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 EFSO43281 561 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 TNFSF15O95150 251 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 PCDH8O95206 1070 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 CSF2P04141 144 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 NME1P15531 152 aaKnown RBP16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 CHRNA3P32297 505 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 MLLT3P42568 568 aaPredicted RBP16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 GPD2P43304 727 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 SYKP43405 635 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 IRAK1P51617 712 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 CENPCQ03188 943 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 CCDC15Q0P6D6 951 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 EIF4EBP2Q13542 120 aaPredicted RBP16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 LINC00303Q3SY05 128 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 TMEM259Q4ZIN3 620 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 C6orf132Q5T0Z8 1188 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 FBXL22Q6P050 247 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 ARL14Q8N4G2 192 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 TPCN2Q8NHX9 752 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 WDR36Q8NI36 951 aaKnown RBP16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 FAM174AQ8TBP5 190 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 KAT5Q92993 513 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 TRIM62Q9BVG3 475 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 NCKIPSDQ9NZQ3 722 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 SLC12A6Q9UHW9 1150 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 KLF15Q9UIH9 416 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 VPS28Q9UK41 221 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 HS3ST3A1Q9Y663 406 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 CSNK1G3Q9Y6M4 447 aa16.86■□□□□ 0.29
APOBEC3F-203ENST00000476513 SPTY2D1-AS1A0A0U1RR47 76 aa16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 POM121BA6NF01 834 aa16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 CASC3O15234 703 aaKnown RBP16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 SLC16A3O15427 465 aaKnown RBP16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 TCEA3O75764 348 aa16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 MT-CO1P00395 513 aa16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 SRCP12931 536 aa16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 ACADSBP45954 432 aa16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 NDUFA8P51970 172 aa16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 DEFB133Q30KQ1 61 aa16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 PERM1Q5SV97 790 aa16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 TMIEQ8NEW7 156 aa16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 OR2A12Q8NGT7 310 aa16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 RNF34Q969K3 372 aa16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 SLC35C1Q96A29 364 aa16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 RPRD1AQ96P16 312 aaPredicted RBP16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 NT5C1BQ96P26 610 aa16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 POPDC2Q9HBU9 364 aa16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 DYRK4Q9NR20 520 aa16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 SALL4Q9UJQ4 1053 aa16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 ATXN7L1Q9ULK2 861 aaPredicted RBP16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 HS3ST2Q9Y278 367 aa16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 FARP1Q9Y4F1 1045 aaPredicted RBP16.85■□□□□ 0.29
APOBEC3F-203ENST00000476513 H3BM21 787 aa16.84■□□□□ 0.29
APOBEC3F-203ENST00000476513 RIOK3O14730 519 aaKnown RBP16.84■□□□□ 0.29
APOBEC3F-203ENST00000476513 AQP9O43315 295 aa16.84■□□□□ 0.29
APOBEC3F-203ENST00000476513 PDX1P52945 283 aa16.84■□□□□ 0.29
APOBEC3F-203ENST00000476513 YWHAZP63104 245 aaKnown RBP16.84■□□□□ 0.29
APOBEC3F-203ENST00000476513 NFKB2Q00653 900 aa16.84■□□□□ 0.29
APOBEC3F-203ENST00000476513 FGL2Q14314 439 aa16.84■□□□□ 0.29
APOBEC3F-203ENST00000476513 DRAP1Q14919 205 aaPredicted RBP16.84■□□□□ 0.29
APOBEC3F-203ENST00000476513 NR0B2Q15466 257 aa16.84■□□□□ 0.29
APOBEC3F-203ENST00000476513 COLEC12Q5KU26 742 aa16.84■□□□□ 0.29
APOBEC3F-203ENST00000476513 KYAT3Q6YP21 454 aaKnown RBP16.84■□□□□ 0.29
APOBEC3F-203ENST00000476513 ERN2Q76MJ5 926 aaKnown RBP16.84■□□□□ 0.29
APOBEC3F-203ENST00000476513 PARGQ86W56 976 aa16.84■□□□□ 0.29
APOBEC3F-203ENST00000476513 PPM1KQ8N3J5 372 aa16.84■□□□□ 0.29
APOBEC3F-203ENST00000476513 CHST14Q8NCH0 376 aa16.84■□□□□ 0.29
APOBEC3F-203ENST00000476513 SLC4A5Q9BY07 1137 aa16.84■□□□□ 0.29
APOBEC3F-203ENST00000476513 HDAC8Q9BY41 377 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms