RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 SUPT3HB4E1H0 165 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 CES2O00748 559 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 INPP4BO15327 924 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 XPOTO43592 962 aaKnown RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 CLPTM1O96005 669 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 NCK1P16333 377 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 ERCC2P18074 760 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 DNAJB2P25686 324 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 ANXA13P27216 316 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 CCR1P32246 355 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 GRIA3P42263 894 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 DRG2P55039 364 aaKnown RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 DGCR6Q14129 220 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 RBBP7Q16576 425 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 FAM110CQ1W6H9 321 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 C16orf87Q6PH81 154 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 C17orf99Q6UX52 265 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 PRR23BQ6ZRT6 265 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 SYDE1Q6ZW31 735 aaPredicted RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 TMC7Q7Z402 723 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 ATPAF2Q8N5M1 289 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 MSL3Q8N5Y2 521 aaKnown RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 SMARCAD1Q9H4L7 1026 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 SNX15Q9NRS6 342 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 EXD2Q9NVH0 621 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 RBM22Q9NW64 420 aaKnown RBP eCLIP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 ARHGAP28Q9P2N2 729 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 EVLQ9UI08 416 aaPredicted RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 ZMYM5Q9UJ78 669 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 STAP1Q9ULZ2 295 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 ANGPTL3Q9Y5C1 460 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 C5orf60A6NFR6 353 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 SIGLEC16A6NMB1 481 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 LINGO3P0C6S8 592 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 T-ENOLP0DO92 83 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 ZNF23P17027 643 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 KLRC2P26717 231 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 STIP1P31948 543 aaKnown RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 OR1G1P47890 313 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 GRIA4P48058 902 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 SCNN1GP51170 649 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 HSD17B4P51659 736 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 CCR3P51677 355 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 CREB5Q02930 508 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 RARS2Q5T160 578 aaKnown RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 ARMC12Q5T9G4 340 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 RNF43Q68DV7 783 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 METTL7BQ6UX53 244 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 FRMD7Q6ZUT3 714 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 SLC9A9Q8IVB4 645 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 TRIM42Q8IWZ5 723 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 SAMD3Q8N6K7 520 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 ACVR1CQ8NER5 493 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 CLHC1Q8NHS4 586 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 PANX3Q96QZ0 392 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 DGCR6LQ9BY27 220 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 FBRSL1Q9HCM7 1045 aaKnown RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 OLA1Q9NTK5 396 aaKnown RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 BARX2Q9UMQ3 279 aaPredicted RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 LRCH1Q9Y2L9 728 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 FFAR3O14843 346 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 GPR42O15529 346 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 ZBTB24O43167 697 aaPredicted RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 SIN3BO75182 1162 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 TBX18O95935 607 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 CYP1A1P04798 512 aaPredicted RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 LGALS2P05162 132 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 MCF2P10911 925 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 CHRM3P20309 590 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 NMBRP28336 390 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 ATICP31939 592 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 ECT2LQ008S8 904 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 STILQ15468 1287 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 FSCN1Q16658 493 aaKnown RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 MGAT5BQ3V5L5 792 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 LACTB2Q53H82 288 aaPredicted RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 SLC45A4Q5BKX6 768 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 LRRC73Q5JTD7 316 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 FBXO47Q5MNV8 452 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 SEL1L3Q68CR1 1132 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 ARHGAP36Q6ZRI8 547 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 BBS12Q6ZW61 710 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 TTC30AQ86WT1 665 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 ZNF677Q86XU0 584 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 SLC44A2Q8IWA5 706 aaPredicted RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 CLEC4FQ8N1N0 589 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 SCAMP5Q8TAC9 235 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 RNF217Q8TC41 542 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 NRG4Q8WWG1 115 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 CENPTQ96BT3 561 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 FAM193BQ96PV7 902 aaPredicted RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 STRA6Q9BX79 667 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 GCOM2Q9BZD3 368 aaPredicted RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 ZNF518BQ9C0D4 1074 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 ILKAPQ9H0C8 392 aaPredicted RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 GPAMQ9HCL2 828 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 VCX3AQ9NNX9 186 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 AVENQ9NQS1 362 aaPredicted RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 PLK2Q9NYY3 685 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 CDYLQ9Y232 598 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms