RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 METTL3Q86U44 580 aaKnown RBP30.18■■■□□ 2.42
HOXB3-208ENST00000476342 NT5DC3Q86UY8 548 aa30.18■■■□□ 2.42
HOXB3-208ENST00000476342 LONP2Q86WA8 852 aa30.18■■■□□ 2.42
HOXB3-208ENST00000476342 PGBD3Q8N328 593 aa30.18■■■□□ 2.42
HOXB3-208ENST00000476342 MDGA1Q8NFP4 955 aa30.18■■■□□ 2.42
HOXB3-208ENST00000476342 TRAF3IP1Q8TDR0 691 aaPredicted RBP30.18■■■□□ 2.42
HOXB3-208ENST00000476342 RBM41Q96IZ5 413 aaKnown RBP30.18■■■□□ 2.42
HOXB3-208ENST00000476342 RNF157Q96PX1 679 aa30.18■■■□□ 2.42
HOXB3-208ENST00000476342 PRDM16Q9HAZ2 1276 aa30.18■■■□□ 2.42
HOXB3-208ENST00000476342 PRSS16Q9NQE7 514 aa30.18■■■□□ 2.42
HOXB3-208ENST00000476342 ZSCAN32Q9NX65 697 aa30.18■■■□□ 2.42
HOXB3-208ENST00000476342 MFHAS1Q9Y4C4 1052 aa30.18■■■□□ 2.42
HOXB3-208ENST00000476342 PCDHA3Q9Y5H8 950 aa30.18■■■□□ 2.42
HOXB3-208ENST00000476342 NYNRINQ9P2P1 1898 aaKnown RBP30.18■■■□□ 2.42
HOXB3-208ENST00000476342 ZRANB2O95218 330 aaKnown RBP eCLIP30.17■■■□□ 2.42
HOXB3-208ENST00000476342 CTNNA2P26232 953 aa30.17■■■□□ 2.42
HOXB3-208ENST00000476342 PXNP49023 591 aaPredicted RBP30.17■■■□□ 2.42
HOXB3-208ENST00000476342 PAPOLAP51003 745 aaKnown RBP30.17■■■□□ 2.42
HOXB3-208ENST00000476342 NCBP2-AS2Q69YL0 99 aa30.17■■■□□ 2.42
HOXB3-208ENST00000476342 OR2T3Q8NH03 318 aa30.17■■■□□ 2.42
HOXB3-208ENST00000476342 FRS2Q8WU20 508 aa30.17■■■□□ 2.42
HOXB3-208ENST00000476342 KRT35Q92764 455 aa30.17■■■□□ 2.42
HOXB3-208ENST00000476342 NELL1Q92832 810 aa30.17■■■□□ 2.42
HOXB3-208ENST00000476342 ALS2CR12Q96Q35 445 aa30.17■■■□□ 2.42
HOXB3-208ENST00000476342 CACNA1HO95180 2353 aa30.17■■■□□ 2.42
HOXB3-208ENST00000476342 AXIN1O15169 862 aa30.16■■■□□ 2.42
HOXB3-208ENST00000476342 SIN3BO75182 1162 aa30.16■■■□□ 2.42
HOXB3-208ENST00000476342 GABRG2P18507 467 aa30.16■■■□□ 2.42
HOXB3-208ENST00000476342 MARCKSL1P49006 195 aa30.16■■■□□ 2.42
HOXB3-208ENST00000476342 FNTBP49356 437 aa30.16■■■□□ 2.42
HOXB3-208ENST00000476342 DMWDQ09019 674 aa30.16■■■□□ 2.42
HOXB3-208ENST00000476342 PAFAH1B3Q15102 231 aaKnown RBP30.16■■■□□ 2.42
HOXB3-208ENST00000476342 ZC3H14Q6PJT7 736 aaKnown RBP30.16■■■□□ 2.42
HOXB3-208ENST00000476342 WDR5BQ86VZ2 330 aa30.16■■■□□ 2.42
HOXB3-208ENST00000476342 RCOR2Q8IZ40 523 aa30.16■■■□□ 2.42
HOXB3-208ENST00000476342 EXD1Q8NHP7 514 aa30.16■■■□□ 2.42
HOXB3-208ENST00000476342 UBE2Q2Q8WVN8 375 aa30.16■■■□□ 2.42
HOXB3-208ENST00000476342 CASKIN2Q8WXE0 1202 aa30.16■■■□□ 2.42
HOXB3-208ENST00000476342 PTPRN2Q92932 1015 aa30.16■■■□□ 2.42
HOXB3-208ENST00000476342 CCDC114Q96M63 670 aa30.16■■■□□ 2.42
HOXB3-208ENST00000476342 CEP44Q9C0F1 390 aa30.16■■■□□ 2.42
HOXB3-208ENST00000476342 MTG2Q9H4K7 406 aa30.16■■■□□ 2.42
HOXB3-208ENST00000476342 PCDHGA2Q9Y5H1 932 aa30.16■■■□□ 2.42
HOXB3-208ENST00000476342 MUC6Q6W4X9 2439 aa30.16■■■□□ 2.42
HOXB3-208ENST00000476342 MIF4GDA9UHW6 222 aaKnown RBP30.15■■■□□ 2.42
HOXB3-208ENST00000476342 NDUFV2P19404 249 aa30.15■■■□□ 2.42
HOXB3-208ENST00000476342 C22orf39Q6P5X5 142 aa30.15■■■□□ 2.42
HOXB3-208ENST00000476342 MFSD7Q6UXD7 560 aa30.15■■■□□ 2.42
HOXB3-208ENST00000476342 CCDC50Q8IVM0 306 aa30.15■■■□□ 2.42
HOXB3-208ENST00000476342 PQLC3Q8N755 202 aa30.15■■■□□ 2.42
HOXB3-208ENST00000476342 UBL4BQ8N7F7 174 aa30.15■■■□□ 2.42
HOXB3-208ENST00000476342 SP110Q9HB58 689 aa30.15■■■□□ 2.42
HOXB3-208ENST00000476342 K7ERQ8 282 aa30.14■■■□□ 2.42
HOXB3-208ENST00000476342 ZSCAN12O43309 604 aa30.14■■■□□ 2.42
HOXB3-208ENST00000476342 FTCDO95954 541 aa30.14■■■□□ 2.42
HOXB3-208ENST00000476342 ZFXP17010 805 aaPredicted RBP30.14■■■□□ 2.42
HOXB3-208ENST00000476342 COPAP53621 1224 aa30.14■■■□□ 2.42
HOXB3-208ENST00000476342 C9orf64Q5T6V5 341 aa30.14■■■□□ 2.42
HOXB3-208ENST00000476342 RFX6Q8HWS3 928 aa30.14■■■□□ 2.42
HOXB3-208ENST00000476342 TMPRSS6Q8IU80 811 aa30.14■■■□□ 2.42
HOXB3-208ENST00000476342 NETO2Q8NC67 525 aa30.14■■■□□ 2.42
HOXB3-208ENST00000476342 MRGPRX1Q96LB2 322 aa30.14■■■□□ 2.42
HOXB3-208ENST00000476342 TPSD1Q9BZJ3 242 aa30.14■■■□□ 2.42
HOXB3-208ENST00000476342 MKRN2Q9H000 416 aaKnown RBP30.14■■■□□ 2.42
HOXB3-208ENST00000476342 FARP1Q9Y4F1 1045 aaPredicted RBP30.14■■■□□ 2.42
HOXB3-208ENST00000476342 SMAD6O43541 496 aaKnown RBP30.13■■■□□ 2.41
HOXB3-208ENST00000476342 MFSD11O43934 449 aa30.13■■■□□ 2.41
HOXB3-208ENST00000476342 PRAMEF11O60813 436 aa30.13■■■□□ 2.41
HOXB3-208ENST00000476342 RNASEH1O60930 286 aaKnown RBP30.13■■■□□ 2.41
HOXB3-208ENST00000476342 CD160O95971 181 aa30.13■■■□□ 2.41
HOXB3-208ENST00000476342 CDKN2BP42772 138 aa30.13■■■□□ 2.41
HOXB3-208ENST00000476342 RWDD2BP57060 319 aa30.13■■■□□ 2.41
HOXB3-208ENST00000476342 ELAVL3Q14576 367 aaKnown RBP30.13■■■□□ 2.41
HOXB3-208ENST00000476342 INO80DQ53TQ3 878 aaPredicted RBP30.13■■■□□ 2.41
HOXB3-208ENST00000476342 TFDP3Q5H9I0 405 aa30.13■■■□□ 2.41
HOXB3-208ENST00000476342 SPOCD1Q6ZMY3 1216 aa30.13■■■□□ 2.41
HOXB3-208ENST00000476342 Q6ZVU0 165 aa30.13■■■□□ 2.41
HOXB3-208ENST00000476342 LRRC49Q8IUZ0 686 aa30.13■■■□□ 2.41
HOXB3-208ENST00000476342 ATPAF2Q8N5M1 289 aa30.13■■■□□ 2.41
HOXB3-208ENST00000476342 PCDH20Q8N6Y1 951 aaKnown RBP30.13■■■□□ 2.41
HOXB3-208ENST00000476342 ZBTB44Q8NCP5 570 aa30.13■■■□□ 2.41
HOXB3-208ENST00000476342 UBA2Q9UBT2 640 aaPredicted RBP30.13■■■□□ 2.41
HOXB3-208ENST00000476342 FANCMQ8IYD8 2048 aa30.13■■■□□ 2.41
HOXB3-208ENST00000476342 APOL1O14791 398 aa30.13■■■□□ 2.41
HOXB3-208ENST00000476342 VAV1P15498 845 aa30.13■■■□□ 2.41
HOXB3-208ENST00000476342 COPS2P61201 443 aa30.13■■■□□ 2.41
HOXB3-208ENST00000476342 TFDP2Q14188 446 aa30.13■■■□□ 2.41
HOXB3-208ENST00000476342 SLC9A4Q6AI14 798 aa30.13■■■□□ 2.41
HOXB3-208ENST00000476342 KIAA1324Q6UXG2 1013 aaKnown RBP30.13■■■□□ 2.41
HOXB3-208ENST00000476342 PRCCQ92733 491 aaPredicted RBP30.13■■■□□ 2.41
HOXB3-208ENST00000476342 ISG20Q96AZ6 181 aaKnown RBP30.13■■■□□ 2.41
HOXB3-208ENST00000476342 SIPA1Q96FS4 1042 aa30.13■■■□□ 2.41
HOXB3-208ENST00000476342 PDFQ9HBH1 243 aa30.13■■■□□ 2.41
HOXB3-208ENST00000476342 IPO11Q9UI26 975 aaKnown RBP30.13■■■□□ 2.41
HOXB3-208ENST00000476342 FCF1Q9Y324 198 aaKnown RBP30.13■■■□□ 2.41
HOXB3-208ENST00000476342 ACTL7AQ9Y615 435 aa30.13■■■□□ 2.41
HOXB3-208ENST00000476342 RECQLP46063 649 aaPredicted RBP30.12■■■□□ 2.41
HOXB3-208ENST00000476342 IL10RBQ08334 325 aa30.12■■■□□ 2.41
HOXB3-208ENST00000476342 TAZQ16635 292 aa30.12■■■□□ 2.41
HOXB3-208ENST00000476342 LEKR1Q6ZMV7 388 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms