RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 ANKRD11Q6UB99 2663 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-207ENST00000475549 E9PAM4 449 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 FAM72CH0Y354 149 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 TRIM38O00635 465 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 ALOX15BO15296 676 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 SLC7A4O43246 635 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 BNIP3LO60238 219 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 SRGAP2O75044 1071 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 GJB6O95452 261 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 CYP1A1P04798 512 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-207ENST00000475549 GIMD1P0DJR0 217 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 ZNF18P17022 549 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 EPHA8P29322 1005 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-207ENST00000475549 CHRNA3P32297 505 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 SCNN1AP37088 669 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 BPIFB4P59827 614 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 NOMO3P69849 1222 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 ARF5P84085 180 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 DEUP1Q05D60 604 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 CYP4F3Q08477 520 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 PTP4A2Q12974 167 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 ZNF284Q2VY69 593 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 CCDC14Q49A88 953 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 CCDC157Q569K6 752 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 BRMS1LQ5PSV4 323 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 FAM102AQ5T9C2 384 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-207ENST00000475549 FAM72AQ5TYM5 149 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 SFMBT2Q5VUG0 894 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 CDKAL1Q5VV42 579 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 NAA35Q5VZE5 725 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 NAPEPLDQ6IQ20 393 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 FAM72DQ6L9T8 149 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 DPY19L3Q6ZPD9 716 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 CLEC17AQ6ZS10 378 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 PHLDB2Q86SQ0 1253 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 TRIM69Q86WT6 500 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 ERICH1Q86X53 443 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 FAM72BQ86X60 149 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 FAM131BQ86XD5 332 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 EMC1Q8N766 993 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 MFSD2AQ8NA29 543 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 ATP11CQ8NB49 1132 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 TMIEQ8NEW7 156 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 OR7D4Q8NG98 312 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 SLC30A5Q8TAD4 765 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 EPS8L1Q8TE68 723 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 OR8D1Q8WZ84 308 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 HAPLN3Q96S86 360 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 PCDHB18PQ96TA0 734 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 MUC3BQ9H195 1237 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 GANQ9H2C0 597 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 TNKS2Q9H2K2 1166 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 KDM4CQ9H3R0 1056 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 CCDC86Q9H6F5 360 aaKnown RBP7.19□□□□□ -1.26
HDAC3-207ENST00000475549 GDF3Q9NR23 364 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 LMBRD1Q9NUN5 540 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 NDFIP2Q9NV92 336 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 TAB2Q9NYJ8 693 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 SLC25A13Q9UJS0 675 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 LHX6Q9UPM6 363 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 ZFR2Q9UPR6 939 aaKnown RBP7.19□□□□□ -1.26
HDAC3-207ENST00000475549 NEU3Q9UQ49 428 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 WASF2Q9Y6W5 498 aa7.19□□□□□ -1.26
HDAC3-207ENST00000475549 A0A1W2PQU0 124 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 GOLGA8SH3BPF8 625 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 SLC31A1O15431 190 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 RNGTTO60942 597 aaKnown RBP7.18□□□□□ -1.26
HDAC3-207ENST00000475549 SDC3O75056 442 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 GFPT2O94808 682 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 LSM8O95777 96 aaKnown RBP7.18□□□□□ -1.26
HDAC3-207ENST00000475549 F9P00740 461 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 ITGAVP06756 1048 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 RHOCP08134 193 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 UNGP13051 313 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-207ENST00000475549 PRLRP16471 622 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 MMP8P22894 467 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 OR1E1P30953 314 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 GKP32189 559 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 ACADVLP49748 655 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 JAM2P57087 298 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 SNX16P57768 344 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 ATP11AP98196 1134 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 FMO1Q01740 532 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 CDR2Q01850 454 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 MTA1Q13330 715 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 FGL2Q14314 439 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 TPD52L1Q16890 204 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-207ENST00000475549 C15orf59Q2T9L4 293 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-207ENST00000475549 PROX2Q3B8N5 592 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 TMEM259Q4ZIN3 620 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 ARSIQ5FYB1 569 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 C6orf118Q5T5N4 469 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 MANEALQ5VSG8 457 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 FAM46CQ5VWP2 391 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 SEL1L3Q68CR1 1132 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 KDM7AQ6ZMT4 941 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 ARCQ7LC44 396 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 DSG4Q86SJ6 1040 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 PRPF39Q86UA1 669 aaKnown RBP7.18□□□□□ -1.26
HDAC3-207ENST00000475549 IQCHQ86VS3 1027 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms