RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ASLP04424 464 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 ADRB1P08588 477 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 KRT7P08729 469 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 OXTRP30559 389 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 CXCR5P32302 372 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 PCK1P35558 622 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 CSKP41240 450 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 MATKP42679 507 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 DUOXA1Q1HG43 343 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 C5orf22Q49AR2 442 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 FNDC3BQ53EP0 1204 aaKnown RBP16.04■□□□□ 0.16
CPSF3-203ENST00000475482 PPM1JQ5JR12 505 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 BNIPLQ7Z465 357 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 POLNQ7Z5Q5 900 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 CREG2Q8IUH2 290 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 CADM4Q8NFZ8 388 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 JOSD2Q8TAC2 188 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 CEP76Q8TAP6 659 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 ACTRT1Q8TDG2 376 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 DNASE2BQ8WZ79 361 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 TOE1Q96GM8 510 aaKnown RBP16.04■□□□□ 0.16
CPSF3-203ENST00000475482 CAPZA3Q96KX2 299 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 CARD6Q9BX69 1037 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 TRIM7Q9C029 511 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 FAM204AQ9H8W3 233 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 TMEM51Q9NW97 253 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 RRN3Q9NYV6 651 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 KIAA1522Q9P206 1035 aaPredicted RBP16.04■□□□□ 0.16
CPSF3-203ENST00000475482 SUN2Q9UH99 717 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 SLC12A6Q9UHW9 1150 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 TTC7AQ9ULT0 858 aaPredicted RBP16.04■□□□□ 0.16
CPSF3-203ENST00000475482 STAP1Q9ULZ2 295 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 DOCK4Q8N1I0 1966 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 ACACBO00763 2458 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 EFCAB8A8MWE9 144 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 F5H5T6 163 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 CEP104O60308 925 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 SERPINF2P08697 491 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 PTPN9P43378 593 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 PLK1P53350 603 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 CDH18Q13634 790 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 PLEKHG6Q3KR16 790 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 PITRM1Q5JRX3 1037 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 TTC39BQ5VTQ0 682 aaPredicted RBP16.03■□□□□ 0.16
CPSF3-203ENST00000475482 CCDC70Q6NSX1 233 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 FBXL22Q6P050 247 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 ZNF572Q7Z3I7 529 aaPredicted RBP16.03■□□□□ 0.16
CPSF3-203ENST00000475482 RABEPKQ7Z6M1 372 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 CHSY1Q86X52 802 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 CARNMT1Q8N4J0 409 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 DEFB119Q8N690 84 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 COG1Q8WTW3 980 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 RXFP2Q8WXD0 754 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 FOXJ1Q92949 421 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 HSPA12BQ96MM6 686 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 NUSAP1Q9BXS6 441 aaKnown RBP16.03■□□□□ 0.16
CPSF3-203ENST00000475482 TMEM9BQ9NQ34 198 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 ARHGEF38Q9NXL2 777 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.03■□□□□ 0.16
CPSF3-203ENST00000475482 SLC6A14Q9UN76 642 aa16.03■□□□□ 0.16
CPSF3-203ENST00000475482 NYNRINQ9P2P1 1898 aaKnown RBP16.03■□□□□ 0.16
CPSF3-203ENST00000475482 ATXN2Q99700 1313 aaKnown RBP16.02■□□□□ 0.16
CPSF3-203ENST00000475482 I6L893 689 aaPredicted RBP16.02■□□□□ 0.16
CPSF3-203ENST00000475482 M0QYT0 321 aa16.02■□□□□ 0.16
CPSF3-203ENST00000475482 ZNF185O15231 689 aa16.02■□□□□ 0.16
CPSF3-203ENST00000475482 NDUFS2O75306 463 aa16.02■□□□□ 0.16
CPSF3-203ENST00000475482 SRPRAP08240 638 aaKnown RBP16.02■□□□□ 0.16
CPSF3-203ENST00000475482 TFE3P19532 575 aaPredicted RBP16.02■□□□□ 0.16
CPSF3-203ENST00000475482 CXCR3P49682 368 aa16.02■□□□□ 0.16
CPSF3-203ENST00000475482 PEX5P50542 639 aa16.02■□□□□ 0.16
CPSF3-203ENST00000475482 RPS14P62263 151 aaKnown RBP16.02■□□□□ 0.16
CPSF3-203ENST00000475482 ZBTB16Q05516 673 aa16.02■□□□□ 0.16
CPSF3-203ENST00000475482 SLC12A1Q13621 1099 aa16.02■□□□□ 0.16
CPSF3-203ENST00000475482 HNRNPA1L2Q32P51 320 aaKnown RBP16.02■□□□□ 0.16
CPSF3-203ENST00000475482 ZFYVE27Q5T4F4 411 aa16.02■□□□□ 0.16
CPSF3-203ENST00000475482 ARTNQ5T4W7 220 aa16.02■□□□□ 0.16
CPSF3-203ENST00000475482 CXorf57Q6NSI4 855 aaKnown RBP16.02■□□□□ 0.16
CPSF3-203ENST00000475482 KATNAL2Q8IYT4 538 aa16.02■□□□□ 0.16
CPSF3-203ENST00000475482 ZNF683Q8IZ20 524 aa16.02■□□□□ 0.16
CPSF3-203ENST00000475482 RASGEF1CQ8N431 466 aa16.02■□□□□ 0.16
CPSF3-203ENST00000475482 EMC1Q8N766 993 aa16.02■□□□□ 0.16
CPSF3-203ENST00000475482 ZNF366Q8N895 744 aa16.02■□□□□ 0.16
CPSF3-203ENST00000475482 MAIP1Q8WWC4 291 aa16.02■□□□□ 0.16
CPSF3-203ENST00000475482 IGSF8Q969P0 613 aa16.02■□□□□ 0.16
CPSF3-203ENST00000475482 ALG14Q96F25 216 aa16.02■□□□□ 0.16
CPSF3-203ENST00000475482 RBM41Q96IZ5 413 aaKnown RBP16.02■□□□□ 0.16
CPSF3-203ENST00000475482 PCED1AQ9H1Q7 454 aa16.02■□□□□ 0.16
CPSF3-203ENST00000475482 RSPH9Q9H1X1 276 aaPredicted RBP16.02■□□□□ 0.16
CPSF3-203ENST00000475482 ANLNQ9NQW6 1124 aa16.02■□□□□ 0.16
CPSF3-203ENST00000475482 PIGVQ9NUD9 493 aa16.02■□□□□ 0.16
CPSF3-203ENST00000475482 HS3ST4Q9Y661 456 aa16.02■□□□□ 0.16
CPSF3-203ENST00000475482 CABIN1Q9Y6J0 2220 aa16.02■□□□□ 0.15
CPSF3-203ENST00000475482 GOLGA6L10A0A0M3HER8 536 aa16.01■□□□□ 0.15
CPSF3-203ENST00000475482 A0A1B0GVM2 712 aa16.01■□□□□ 0.15
CPSF3-203ENST00000475482 TCAF2A6NFQ2 919 aa16.01■□□□□ 0.15
CPSF3-203ENST00000475482 METTL12A8MUP2 240 aa16.01■□□□□ 0.15
CPSF3-203ENST00000475482 H0Y626 953 aa16.01■□□□□ 0.15
CPSF3-203ENST00000475482 ZRANB2O95218 330 aaKnown RBP eCLIP16.01■□□□□ 0.15
CPSF3-203ENST00000475482 ENGP17813 658 aa16.01■□□□□ 0.15
CPSF3-203ENST00000475482 VASPP50552 380 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms