RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 EBF2Q9HAK2 575 aa12.55□□□□□ -0.4
SSR1-205ENST00000475213 PPARGC1AQ9UBK2 798 aaKnown RBP12.55□□□□□ -0.4
SSR1-205ENST00000475213 WASF3Q9UPY6 502 aa12.55□□□□□ -0.4
SSR1-205ENST00000475213 ANKRD6Q9Y2G4 727 aa12.55□□□□□ -0.4
SSR1-205ENST00000475213 FNDC3AQ9Y2H6 1198 aaKnown RBP12.55□□□□□ -0.4
SSR1-205ENST00000475213 ILVBLA1L0T0 632 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 K7ERQ8 282 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 MCF2LO15068 1137 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 ALOX15BO15296 676 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 SMAD6O43541 496 aaKnown RBP12.54□□□□□ -0.4
SSR1-205ENST00000475213 BNIP3LO60238 219 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 TOP3BO95985 862 aaKnown RBP12.54□□□□□ -0.4
SSR1-205ENST00000475213 ZNF883P0CG24 379 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 FERP16591 822 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 GLDCP23378 1020 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 RRM1P23921 792 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 RFC1P35251 1148 aaPredicted RBP12.54□□□□□ -0.4
SSR1-205ENST00000475213 ADRA1BP35368 520 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 HDAC4P56524 1084 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 SIM1P81133 766 aaPredicted RBP12.54□□□□□ -0.4
SSR1-205ENST00000475213 NRG1Q02297 640 aaPredicted RBP12.54□□□□□ -0.4
SSR1-205ENST00000475213 ARL13BQ3SXY8 428 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 KCNT1Q5JUK3 1230 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 FAM46CQ5VWP2 391 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 WDR59Q6PJI9 974 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 LINGO4Q6UY18 593 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 ZNF783Q6ZMS7 281 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 STRADAQ7RTN6 431 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 IRF2BP2Q7Z5L9 587 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 NAXDQ8IW45 347 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 DCAF4L2Q8NA75 395 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 C3orf20Q8ND61 904 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 OR7D4Q8NG98 312 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 PIP4K2CQ8TBX8 421 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 FAM172AQ8WUF8 416 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 FAM131CQ96AQ9 280 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 SELENOOQ9BVL4 669 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 MAGEB5Q9BZ81 275 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 TM7SF3Q9NS93 570 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 OR12D3Q9UGF7 316 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 PPM1HQ9ULR3 514 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 SNX11Q9Y5W9 270 aa12.54□□□□□ -0.4
SSR1-205ENST00000475213 AKAP13Q12802 2813 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 TBC1D3DA0A087WVF3 549 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 TBC1D3IA0A087WXS9 549 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 TBC1D3EA0A087X179 549 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 TBC1D3KA0A087X1G2 549 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 TCRBV5S1A1TA0A578 114 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 TBC1D3FA6NER0 549 aaPredicted RBP12.53□□□□□ -0.4
SSR1-205ENST00000475213 SIGLEC16A6NMB1 481 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 TBC1D3LB9A6J9 549 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 C1QTNF3-AMACRE9PGA6 284 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 FAM72CH0Y354 149 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 RTN2O75298 545 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 CTSLP07711 333 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 CCDC172P0C7W6 258 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 TBC1D3HP0C7X1 549 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 GPD1P21695 349 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 ZNF165P49910 485 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 CCR5P51681 352 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 PPP2CBP62714 309 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 RACK1P63244 317 aaKnown RBP12.53□□□□□ -0.4
SSR1-205ENST00000475213 PPP2CAP67775 309 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 CNTN1Q12860 1018 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 HNRNPDQ14103 355 aaKnown RBP12.53□□□□□ -0.4
SSR1-205ENST00000475213 POM121L1PQ3SYA9 428 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 FAM72AQ5TYM5 149 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 MANEALQ5VSG8 457 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 TBC1D3GQ6DHY5 549 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 TBC1D3CQ6IPX1 549 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 FAM72DQ6L9T8 149 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 ADAT2Q7Z6V5 191 aaKnown RBP12.53□□□□□ -0.4
SSR1-205ENST00000475213 FAM72BQ86X60 149 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 DRC7Q8IY82 874 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 TBC1D3Q8IZP1 549 aaPredicted RBP12.53□□□□□ -0.4
SSR1-205ENST00000475213 CCDC185Q8N715 623 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 OR2A12Q8NGT7 310 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 BAP1Q92560 729 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 SLC6A18Q96N87 628 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 FUCA2Q9BTY2 467 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 SPON2Q9BUD6 331 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 OSBPL2Q9H1P3 480 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 MYO6Q9UM54 1294 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 PCDHB9Q9Y5E1 797 aa12.53□□□□□ -0.4
SSR1-205ENST00000475213 TRPM6Q9BX84 2022 aa12.52□□□□□ -0.4
SSR1-205ENST00000475213 ASPMQ8IZT6 3477 aa12.52□□□□□ -0.4
SSR1-205ENST00000475213 KMT2BQ9UMN6 2715 aaPredicted RBP12.52□□□□□ -0.41
SSR1-205ENST00000475213 CBX4O00257 560 aa12.52□□□□□ -0.41
SSR1-205ENST00000475213 KCNK3O14649 394 aa12.52□□□□□ -0.41
SSR1-205ENST00000475213 WNT9AO14904 365 aa12.52□□□□□ -0.41
SSR1-205ENST00000475213 VILLO15195 856 aa12.52□□□□□ -0.41
SSR1-205ENST00000475213 SLC7A4O43246 635 aa12.52□□□□□ -0.41
SSR1-205ENST00000475213 PLRG1O43660 514 aaKnown RBP12.52□□□□□ -0.41
SSR1-205ENST00000475213 CBFA2T3O75081 653 aa12.52□□□□□ -0.41
SSR1-205ENST00000475213 ZMPSTE24O75844 475 aa12.52□□□□□ -0.41
SSR1-205ENST00000475213 LRIG2O94898 1065 aa12.52□□□□□ -0.41
SSR1-205ENST00000475213 WNT1P04628 370 aa12.52□□□□□ -0.41
SSR1-205ENST00000475213 PLEKP08567 350 aaPredicted RBP12.52□□□□□ -0.41
SSR1-205ENST00000475213 SPINK2P20155 84 aa12.52□□□□□ -0.41
SSR1-205ENST00000475213 CHRNA3P32297 505 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms